Dermatobacter hominis: LH044_15645
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Entry
LH044_15645 CDS
T09351
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH044_15645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhi03400
]
LH044_15645
Enzymes [BR:
dhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LH044_15645
DNA repair and recombination proteins [BR:
dhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH044_15645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
UDY34763
LinkDB
All DBs
Position
3323910..3327419
Genome browser
AA seq
1169 aa
AA seq
DB search
MLDVRIADHVDPLVDVLVARMSVPLADPFATEWVAVPSIGMRRWLAQRLAHGLGTSVGDD
GVTANVAMPFPDELRRAVLAADLGGPTAAADPWDAERLVWSVLDALLDPSISQVPTLAAV
AQPPDGASIVSRAQSVAELFDRYCRHRPAMVRAWIAGSDVDALGGPVPDGHAWQPELFRR
VRSRLAVPSPPERLEHAIERVRRGEVALDLPPRLALFGLSTVPPDVAPLVGAVAEHHDVA
VLLLTASEVAAAAVSAAVRESGVGTPLARRDDRTADLVRHPLLRSWGDAGREAVVTLSAA
GVVVDVPPSSTPVQMSLDLGDVAGGPDGDHADQGPEQLTLDRAPAEGAPHLLARVRSDLR
ADRAPDRTFRLRPGDRSVQVHACTGPARQVEVLRDSILHLLASDGSLTEGDIVVLCPRIE
EFAPVVEAVFGPSADATADRGDVDGDDALRAPLLRYRITDRRLRADVPLLGVLGALLDVL
PGRFTASGVADLLAMGPVADRFGLTADDLALLDDWICEANVRWGLDGAHRAAWHLPSGHR
SNSWAAGLDQLMMGAAIRGDHLTTAIGGVPPLAVADGSIRTAARVAEAVRTLAAVRARTV
GTTATVTEWCELLAGAVDEMCSLPWAESWQRRRLDRVLRDLRDRSQGPDGEPSELPLDLS
DVRRLVADLLEGDPARAAFGTGAITLCSLSPLRSVPARVVCVLGLDQDALPRGLAQGDDL
LAVAPLVGDRDPRSETRQLLLEAVLAAEDALVITYGAVDVRTNLPVPPAVALDEWLDTLA
ATCAEPPERVRDIVRVAHPRHGFDPRNFSAEGLGDPAGPAVPGPWGFDPLGRSGALSLRD
REPAPGPELLVPSPLETAPTEVVTLDRLRRSLVDPIREFLTQTLGVWFPRVEDDAVDTLP
TDLDGLARHQLGADLLLARAAGIDTERWLETARARGSLPPEPLSRSGMETVRRVVDQIER
SAMELGVGLAPSARHDIDLLIGDQRLIGTVERCVDGDRPGPVRLEMSKAKAGQRVRAVVD
LLALVATDPTQDWRAVVIRQTTRTKSARADELLLGVVGDDPDERRCRAIEVLEELLALRA
AMLREPLPIVEKTSCHLARHEMTKAASAWNDVVGANPIPGECSDQHVRAAFGSLDFDGFM
SLRIAGRSTRDHAEELWRVLDAAVVEEEP
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtccggatcgccgaccacgtcgaccccctcgtcgacgtgctcgtggcgcgg
atgtccgtgccgctggcggacccgttcgcgaccgagtgggtggcggtgccgtcgatcggc
atgcggcggtggctcgcccagcgcctggcgcacgggctcggcacctcggtcggcgacgac
ggggtgacggccaacgtcgccatgcccttccccgacgagctccgccgggccgtgctcgcc
gccgacctcggcggcccgacggcggccgccgatccgtgggatgcggagcggctcgtgtgg
tcggtcctcgatgcgctgctcgatccctcgatcagccaggtcccgacgctcgccgccgtg
gcccagccccccgacggcgcgtcgatcgtcagccgtgcgcagtccgtggccgagctgttc
gatcgctactgccgccaccgcccggccatggtgcgggcgtggatcgcgggctcggacgtc
gatgcgctcggcggccccgtgcccgacggccacgcctggcagcccgagctgttccggcgc
gtccgctcgcgactggcggtgcccagcccacccgagcggctcgagcacgcgatcgagcgc
gtccgccgtggtgaggtggcgctggacctgcccccacggctggcgctgttcgggctgagc
accgtgccgccagacgtggcgccgctggtgggcgccgtggcggagcaccacgacgtggcc
gtgctgctgctcaccgcgtccgaggtcgcagcggcggcggtgagcgccgccgtgagggag
tccggggtcgggacgccgctcgcccggcgggacgaccgcacggccgacctggtgcgccac
ccgctgctgcggtcgtggggcgacgccgggcgcgaggcggtggtgacgctcagcgcagcc
ggtgtcgtggtcgacgtgccgccgtcgtcgacgcccgtgcagatgtcgctcgacctcggc
gacgtggccggcgggcccgacggcgatcacgccgaccaggggcccgagcagctgacgctc
gatcgcgcacctgcggagggtgcgccgcacctcctcgcccgcgtccggtccgacctgcgc
gccgaccgcgcccccgaccgcaccttccgcctccgcccgggggaccgctcggtccaggtg
cacgcctgcacggggccggctcgccaggtcgaggtgctgcgggactcgatcctccacctg
ctcgcttccgacgggtcgctcaccgagggcgacatcgtggtgctctgcccccggatcgag
gagttcgctcccgtcgtcgaggcggtgttcggcccgtccgccgacgccaccgcggaccgc
ggcgacgtggatggcgacgacgccctgcgggccccgctgctccggtaccgcatcacggat
cgtcggctccgcgccgacgtcccgctgctcggggtgctgggggcgctgctcgacgtgctc
cccggtcggttcacggcgtccggggtggccgacctgctcgccatgggacccgtggccgac
cggttcggcctgaccgccgacgacctcgcgctgctcgacgactggatctgcgaggccaac
gtccggtggggcctcgacggtgcgcaccgcgcggcctggcacctcccgtccggtcaccgg
tcgaacagctgggccgcggggctggaccagctgatgatgggcgccgcgatccgcggtgat
cacctcacgacggcgatcgggggtgtcccgccgctggcggtcgcggacgggtcgatccgc
accgccgcccgcgtcgccgaggcggtgcggacgctcgccgccgtccgagcgcgcacggtc
ggcaccactgcgaccgtcacggagtggtgcgagctcctcgccggtgcggtcgacgagatg
tgctcgttgccgtgggccgagagctggcagcggcgtcggctcgaccgcgtcctgcgcgac
ctgcgggaccgatcgcaggggcccgacggcgagccgtcggagctgccgctcgacctgtcc
gacgtccgccggctggtcgccgatctgctcgagggggacccggcccgggccgccttcggc
accggcgcgatcacgttgtgctcgctgtcgccgctccgatcggtgccggcccgggtcgtc
tgcgtgctcgggctcgaccaggacgccctgccccgcggtctggcccagggcgacgacctg
ctcgccgtcgcgccgctcgtgggcgaccgggaccccaggtccgagacgcgccagctcctg
ctcgaggccgtgctcgccgcagaggacgcgctggtgatcacctacggcgccgtcgacgtc
cggaccaacctgcccgtgccgccggccgtcgcgctcgacgagtggctcgacaccctggcg
gccacgtgtgccgaacctccggagcgggtgcgcgacatcgtccgggtggcgcatccgagg
cacggcttcgacccgcgcaacttctcggccgaggggctgggcgacccggccgggccggcc
gtgcccggaccgtgggggttcgaccccctcggtcgctccggcgcgctctcgctgcgcgat
cgggagccggcgcccggtcccgagctcctcgtcccgagcccactcgagaccgcaccgacc
gaggtcgtcacgctcgaccggttgcggcgcagcctggtcgacccgatccgggagttcctc
acgcagacgctcggcgtgtggttcccgagggtcgaggacgacgcggtcgacacgctcccg
accgacctcgacggcctcgcccgccaccagctgggggccgacctgctcttggcgcgcgcc
gccgggatcgacaccgagcggtggctcgagacggcgcgagcacgcgggtcgctcccaccg
gaacccctgtcccggagcggcatggagaccgttcgccgggtggtcgaccagatcgagcgg
tcggcgatggagctcggggtcgggctggcgccgtcggcgcgccacgacatcgacctcctc
atcggggaccagcgcctgatcggcaccgtcgagcgctgcgtcgacggcgatcggcccggt
ccggtccgcctcgagatgtccaaggccaaggcagggcagcgggtccgcgccgtcgtcgac
ctcctcgccctggtggcgaccgatccgacccaggactggagggcggtcgtcatccgtcag
acgaccaggaccaagagcgctcgtgccgacgagctgctgctcggcgtcgtcggtgacgat
cccgacgagcgccggtgccgcgcgatcgaggtcctggaggagctcctcgcgctgcgagcg
gcgatgctgcgtgagccgctgccgatcgtcgagaagacgagctgccacctggcccgacac
gagatgaccaaggcggcgtccgcgtggaacgacgtcgtcggcgccaaccccatcccgggt
gagtgctccgaccagcacgtgcgcgcggcgttcgggtcgctcgacttcgacggcttcatg
tcgctccgcatcgccggccgatccacccgcgaccacgccgaggagctctggcgcgtgctc
gacgcggccgtcgtggaggaggagccgtga
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