Dermatobacter hominis: LH044_15655
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Entry
LH044_15655 CDS
T09351
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LH044_15655 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhi03400
]
LH044_15655 (recD)
Enzymes [BR:
dhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LH044_15655 (recD)
DNA repair and recombination proteins [BR:
dhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LH044_15655 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
UvrD-helicase
NAT10_TcmA_helicase
AAA_16
RecD_N
AAA_25
TraI_hel_assoc_N
nSTAND3
AAA_28
SLFN-g3_helicase
Zeta_toxin
UvrD_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
UDY34765
LinkDB
All DBs
Position
3330832..3332802
Genome browser
AA seq
656 aa
AA seq
DB search
MTRRFLPASVECLRPFVDAGVLGMTEVHVVATFVEVLDPGLAPPDDVVLAAALAVRGPLH
GHVRIDLTEVAGSVVPDERDDGPSAPAADLEGRDDEGPDLDLPALDVDAAPVDPDVTSDG
VTALPWPEPERWARRVLDSALARAEDDDPGDLVPPLVVDGSQVYLDRYWRDERAVADDLR
RRAGRRTDAEPGRLAALDRFLPPSTGPTPDLQRVAARAALERQLVVIAGGPGTGKTRTVS
RLLAVLASDGRGEGGRLDGRSLEIALAAPTGKAAARLEEAINAAVRDADPDPEVAARLGA
LEAQTVHRLLGARRGGASFTRDASNPIAADVVVVDEVSMVSLPLMARLLEAVRPDARVVL
VGDPHQLASVEAGAVLGDLVGGDGGKPPDAIADNVVTLEQVFRFGAESPVGALAAAIRSG
DADAVLDHLVRSPTSSEAPEEEFVCWVRPDDPAAVDGVRSQVLGHAVDLVDLAREGRTTS
ALRSLGAVKVLSATRRGELGADDWNRRVEQELRTTGRMRERWSAGRPVMVTANDYLNGVF
NGDLGVVVRPADVGDRAPRVQVAFDGVDGPRLLDPSRLDRVETQWAMTIHKSQGSEFDDV
VVAMPPPPSPILTRELLYTAVTRARRGVTIVASEASIRAAVGRPVTRSSGLADRLA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccggttcctcccggcgtcggtggagtgcctccggccgttcgtggacgccggc
gtgctcggcatgaccgaggtccacgtcgtggccaccttcgtcgaggtcctcgaccctggc
ctggcgccgcccgacgacgtcgtcctggccgccgcgctcgccgtgcgggggccgctgcac
ggccacgtccgcatcgacctgaccgaggtcgccgggtccgtggtccccgacgagcgcgac
gacgggccgtcggcgccggccgcggacctcgagggccgggacgacgaaggtcccgacctc
gacctgcccgcgctcgacgtcgacgcggcaccggtcgatcccgacgtcacgtccgacggc
gtgaccgcgctgccgtggccggaaccggagcgctgggcgcggcgcgtgctcgacagcgcg
ctcgcccgagccgaggacgacgatcccggcgacctcgtgccgccgttggtggtcgacggc
tcccaggtgtacttggaccgctactggcgtgacgagagggcggtcgcggacgacctccgc
cgtcgggccggtcgccgcacggacgcggagccgggccggttggcggcgctggaccggttc
ctcccgccgtcgacgggaccgacgcccgacctccagcgcgtcgccgcccgggccgcgctc
gagcgccagctcgtcgtgatcgccggcgggcccggtacgggcaagacgcgcaccgtctcc
cgtctgctggcggtgctggcgtccgacggacgtggcgagggcggtcggctcgacggccgc
tcgctcgagatcgccctggcggccccgaccggcaaggcggcggcacgcctcgaggaggcg
atcaacgccgcggtgcgcgacgccgacccggaccccgaggtcgctgcgcgcctgggcgcg
ctcgaggcgcagaccgtccaccgcctgctgggcgcacggcgcggcggcgcgtcgttcacc
cgcgacgcctcgaacccgatcgccgccgacgtcgtggtcgtcgacgaggtgtcgatggtc
tccctgccgctgatggctcggctcctcgaggccgtccggcccgacgcccgggtcgtgctg
gtgggcgatccgcaccagctcgcgagcgtcgaggccggcgccgtcctcggcgacctggtc
ggcggtgacggcgggaagccgccggacgcgatcgccgacaacgtcgtcacgctggagcag
gtgttccgcttcggcgccgaatcgccggtcggcgcgctcgccgcggcgatcaggtccggc
gacgccgatgcggtgctcgatcacctggtccggtcgccgacgagctcggaggcgcccgag
gaggagttcgtgtgctgggtccggccggacgacccggcggccgtggacggggtccgttcg
caggtgctcggtcatgcggtcgacctggtggacctggcgagggagggtcgcaccacgtcg
gcgctgcgatcgctcggtgccgtcaaggtcctctcggcgacgcgtcgtggggagctgggc
gccgacgactggaaccgtcgggtggagcaggagctgcggacgaccggccggatgcgcgag
cgctggtccgccggtcggccggtgatggtgacggccaacgactacctcaacggggtgttc
aacggcgacctcggtgtggtcgtccgccccgccgacgtcggggaccgggcgccacgggtg
caggtggccttcgacggggtcgacggcccccgcctgctggacccgtcgcggctcgaccgg
gtcgagacgcagtgggcgatgacgatccacaagagccagggctcggagttcgacgacgtc
gtggtcgccatgcccccgccgccgtcaccgatcctgacccgggagctgctctacaccgcg
gtgacccgcgcccgtcgcggcgtcacgatcgtggcgtccgaggcgtcgatccgagccgcg
gtcggccggccggtcacgcgctcgtcgggcctcgccgaccgcctggcctga
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