Dermatobacter hominis: LH044_16705
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Entry
LH044_16705 CDS
T09351
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
dhi
Dermatobacter hominis
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhi03021
]
LH044_16705
Transcription machinery [BR:
dhi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LH044_16705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_3
MarR_2
Sigma70_ECF
HTH_24
HTH_31
HTH_28
MarR
UPF0122
HTH_11
HTH_37
HTH_Crp_2
PhyR_sigma-like
HTH_38
HTH_IclR
DUF7343
HTH_10
HTH_17
KORA
Sigma54_DBD
DUF7645
LacI
DUF1492
Motif
Other DBs
NCBI-ProteinID:
UDY34966
LinkDB
All DBs
Position
complement(3568085..3569002)
Genome browser
AA seq
305 aa
AA seq
DB search
MDAPRRTDRTGGQPLDAARVDDLLAEYRRTGDRRARDAVVEGHMALARFTVRRFARNNVG
LEEDLHQVALMAVVFAAERYRPGKGASFPTFARRTIDGELKRYLRDRSWIVRPPRTRQEH
YLRLCRAREEMPHRLGRSPTINEIADELELSVDQVVEAMETQGARRPTSMEPTREPDDTV
SVRPELMSWDRGYGAFESHDDLLRAIDSLDRRQRQALHLRFIDELSQPEIAERLGVSQSY
VSRIIRGALAQLRDTMDAQSVPTDRPAGAARTPSPVEPAGAQRGEQTLRPTGTSGPDVSD
RRRSA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcgccccggcgcaccgatcgcaccggcggccagccgctggacgccgctcgggtc
gacgacctcctcgccgagtaccgccggaccggcgaccgacgggcgcgcgacgccgtggtc
gagggccacatggcgctcgcccggttcaccgtccgacgcttcgcccgcaacaacgtcggg
ctggaggaggacctccaccaggtggcgctcatggccgtggtgttcgccgctgagcgctac
cgaccgggcaagggcgcctccttcccgacgttcgcgcgacggacgatcgacggagagctc
aagcgctacctccgcgacaggtcctggatcgtccgcccgccccggacccgacaggagcac
tacctgcgcctgtgccgagcccgcgaggagatgccgcaccggctcgggcgcagcccgacg
atcaacgagatcgccgacgagctggagctctcggtggaccaggtcgtcgaggccatggag
acccagggagcccgacgaccgacgtcgatggagccgacccgggagcccgatgacaccgtg
tcggtgcggcccgagctcatgagctgggaccgcggctacggcgccttcgagtcccacgac
gacctcctccgggccatcgactcgctggaccggcgacagcgccaggcactgcacctgcgc
ttcatcgacgagctctcccagccggagatcgccgaacggctcggcgtctcgcagtcctac
gtctcacgcatcatcagaggggcgctcgcccagctgcgggacaccatggacgcccagtcc
gtcccgaccgatcggcccgcgggcgcggcgaggacgccgtcgccggtcgaaccggccggc
gcccagcggggcgagcagaccctccggccgacggggacgagcggaccggacgtgtccgat
cgccggcgatcagcgtga
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