Dermatobacter hominis: LH044_19865
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Entry
LH044_19865 CDS
T09351
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi00521
Streptomycin biosynthesis
dhi00523
Polyketide sugar unit biosynthesis
dhi00525
Acarbose and validamycin biosynthesis
dhi00541
Biosynthesis of various nucleotide sugars
dhi01100
Metabolic pathways
dhi01110
Biosynthesis of secondary metabolites
dhi01250
Biosynthesis of nucleotide sugars
Module
dhi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LH044_19865 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LH044_19865 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LH044_19865 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LH044_19865 (rfbB)
00525 Acarbose and validamycin biosynthesis
LH044_19865 (rfbB)
Enzymes [BR:
dhi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LH044_19865 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NAD_binding_4
NmrA
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
UDY35575
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Position
4258978..4259946
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AA seq
322 aa
AA seq
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MRLFVTGGAGFIGSNYVRHVLATTDDSVTVFDALTYAGNRANLAEFDDDPRFTFVHGDIC
DRAAVAAALPGHDAVVHFAAESHVDRSLLDPDVFVRTNCSGTNVMCDLAVEAGVERFLHI
STDEVYGSIDEGSFSETDRLSPRSPYSAAKAGSDLIALAYHETHDLPVVVTRSSNQFGPY
QFPEKLIPFFVTSLLRGRNVPLYGDGLNVRDWLYVLDNCAGVDLVLRQGTVGEIYNIGAG
NELTNRVITDRLLALLGKDESSVTYVEDRKGHDRRYSIRTDKVRELGWAPAKDFDAALEE
TVAFYVQHPEWWEPLLERVRNR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgagactgttcgtgaccggcggcgccggcttcatcggatccaactacgtccgccacgtg
ctcgccacgaccgacgactcggtgacggtgttcgacgcgctgacctacgcgggcaaccgg
gcgaacctcgccgagttcgacgacgacccgcggttcaccttcgtccacggcgacatctgc
gaccgcgccgcggtggccgccgcgctcccgggccacgatgccgtcgtgcacttcgcggcc
gagagccacgtcgaccggtcgctgctcgaccccgacgtgttcgtgcggaccaactgctcc
ggcacgaacgtcatgtgcgacctggccgtggaggccggcgtcgagcggttcctccacatc
tccaccgacgaggtgtacggctcgatcgacgagggctccttcagcgagaccgaccgcctg
agcccccgctcgccgtacagcgcggcgaaggccggctccgacctcatcgccctcgcgtac
cacgagacccacgacctgcccgtggtcgtgacccggtcctcgaaccagttcggcccgtac
cagttccccgagaagctcatcccgttcttcgtgacctcgctgctgcgggggcgcaacgtg
ccgctctacggcgacgggctcaacgtgcgcgactggctgtacgtcctcgacaactgcgcc
ggggtcgacctcgtgctgcggcagggcacggtcggcgagatctacaacatcggcgccggc
aacgagctgaccaaccgggtgatcaccgacaggctcctcgccctcctgggcaaggacgag
tcctcggtcacctacgtcgaggaccgcaagggccacgaccgccgctactcgatccggacc
gacaaggtccgggagctcggctgggctccggccaaggacttcgacgccgcgctcgaggag
accgtcgcgttctacgtccagcaccccgagtggtgggagccgctgctcgagcgggtccgg
aaccgctga
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