Dermatobacter hominis: LH044_20625
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Entry
LH044_20625 CDS
T09351
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dhi
Dermatobacter hominis
Pathway
dhi00550
Peptidoglycan biosynthesis
dhi01100
Metabolic pathways
dhi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LH044_20625 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LH044_20625 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dhi01011
]
LH044_20625 (mrdA)
Enzymes [BR:
dhi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LH044_20625 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dhi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LH044_20625 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
MotB_plug
Motif
Other DBs
NCBI-ProteinID:
UDY35715
LinkDB
All DBs
Position
4414887..4417013
Genome browser
AA seq
708 aa
AA seq
DB search
MDTDSRQVRLSALGIVAVSLFLALFVRLWFLQGIDRQKFEVASASNRLRVIHEEGPRGRI
LDRNGKVIVDNRTSRVVALDREPLRKMDEEERTQHFDELAQTLTDLGRPTKVDLIQKRYA
DQRYAPQEYVPIVDDVTEEVEIYLSERADRFPGVVVETRAVRAYPYGSLAGQVLGYVGET
NEKELAAKGGTLPAGATTTDPPATTTTIEGVPPKPYQPGDLIGKSGVEQSYEDYLRAVPG
SRTIEVNAKGDLIDVVKQEEAKAGDDVWLSIDIDLQAQAERLLKAKIESLRGRTDRTTGA
KLNVPQGSVVIQEPMTGQILAMASYPEFDPGQTVNGISSELWAQLNDPANGRPLYNWALQ
GAYAPGSTFKPFTAYAAMSSGLLPTGNESYVDNGVYKLKACKGTKCEYQNAGRNAHGRVN
VPRSLTVSSDVYYYWIGEQFWVGRDRFGNTPIQDSAKGFGLGDRTGIKLLGENQGRLPTP
EARREAYEANPEAFATGDWFTGDNIITAIGQGDVLVTPLQLADAYATLANGGTRFRPQIV
SKVTRSKDPTLPPGQEGNFEVVTQVEPEELGKVAMTPEQYNQIVSGLVGVTQSGEGTASA
SWRASPTAWPMAGKTGTAQVKDKADTALFAGWGPVAPGGVPQYAISVIVPEAGFGGDVAA
PLAFRILQPASSGQLVPACTVADRANCDLASIAASSASQRDVGSGGPG
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggacactgactcccgccaggtccggctcagcgcgctcggcatcgtggccgtgtcgctg
ttcctcgcgctgttcgtccgcctgtggttcctgcaggggatcgaccggcagaagttcgag
gtcgcctcggcctcgaaccgcctgcgagtgatccacgaggagggcccccgcggccggatc
ctcgaccgcaacggcaaggtcatcgtcgacaaccggacctcccgggtggtggcgctcgac
cgggagcccctgcggaagatggacgaggaggagcggacgcagcacttcgacgagctggcc
cagaccctgaccgacctcgggcggcccaccaaggtcgatctcatccagaagcgctacgcc
gaccagcgctacgccccgcaggagtacgtcccgatcgtcgacgacgtcaccgaggaggtc
gagatctacctctcggagcgggccgaccggttccccggcgtcgtggtcgagacgcgcgcg
gtgcgcgcgtacccctacggctcgctggccgggcaggtgctcggctacgtcggcgagacc
aacgagaaggagctggccgccaagggcggcacgctgccggccggcgccaccacgacggac
ccgccggccaccacgacgacgatcgagggtgtcccgccgaagccgtaccagccgggcgac
ctgatcgggaagtccggggtggagcagtcctacgaggactacctccgggcggtccccggc
agccgcacgatcgaggtgaacgcgaagggcgacctcatcgacgtcgtgaagcaggaggag
gcgaaggccggcgacgacgtgtggctcagcatcgacatcgacctccaggcccaggccgag
cggctgctcaaggccaagatcgagtcgctgcgcgggcggaccgatcggacgaccggcgcc
aagctgaacgtgccgcagggctcggtggtgatccaggagccgatgaccgggcagatcctg
gcgatggcgagctacccggagttcgatccggggcagacggtgaacggcatctcgtcggag
ctgtgggcgcagctcaacgacccggccaacggacggccgctctacaactgggccctccag
ggcgcctacgcacccgggtcgacgttcaagccgttcaccgcgtacgcggcgatgtcgagc
ggcctgctccccaccggcaacgagagctacgtggacaacggcgtctacaagctgaaggcg
tgcaagggcacgaagtgcgagtaccagaacgccggccgcaacgcgcacggccgggtcaac
gtgccgcggtcgctcaccgtgagctcggacgtctactactactggatcggcgagcagttc
tgggtcggccgcgaccgcttcggcaacacgccgatccaggactcggccaaggggttcggc
ctcggcgaccgcaccgggatcaagctgctgggcgagaaccagggtcggctcccgacgccc
gaggcgcgccgcgaggcgtacgaggcgaaccccgaggcgttcgcgactggcgactggttc
accggcgacaacatcatcaccgccatcggccagggcgacgtgctggtgacgccgctgcag
ctggccgacgcctacgccacgctggccaacggtgggacgcgcttccggccccagatcgtc
tcgaaggtcacccgcagcaaggacccgaccctcccgcccggccaggagggcaacttcgag
gtggtgacccaggtcgagcccgaggagctgggcaaggtcgccatgacgcccgagcagtac
aaccagatcgtcagcggcctcgtcggtgtgacccagagcggcgagggcacggcctcggcg
tcctggcgggccagcccgacggcgtggccgatggcgggcaagaccggcacggcccaggtc
aaggacaaggccgacacggcgctcttcgccgggtggggcccggtcgcgcccggcggcgtg
ccgcagtacgcgatcagcgtgatcgtgcccgaggccggcttcggcggcgacgtcgccgcc
ccgctcgcgttccgcatcctccagccggccagctcgggccagctcgtcccggcctgcacg
gtcgcggaccgggccaactgcgacctcgcgtcgatcgccgccagcagcgccagccagcgc
gacgtcggttccggaggcccgggatga
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