Delftia sp. HK171: BO996_04165 Help Entry BO996_04165       CDS       T04584                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism dhk  Delftia sp. HK171 Pathway dhk03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:dhk00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     BO996_04165  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dhk03400]     BO996_04165 DNA repair and recombination proteins [BR:dhk03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      BO996_04165   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       BO996_04165 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 BCA_ABC_TP_C AAA_23 nSTAND1 AAA_21 RsgA_GTPase DnaJ_CXXCXGXG AAA_25 nSTAND3 cobW Viral_helicase1 Motif Other DBs NCBI-ProteinID:  APE47098 LinkDB All DBs Position 924393..927506 Genome browser AA seq 1037 aa AA seqDB search MPGSHTISEDGGLDRAADSRSQPDGRYLGLALAQSRIAIRGARTHNLKNIDLDIPRNRLV VITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLGRLDKPDVDLIEGLSPAISIEQ KATSHNPRSTVGTVTEINDYLRLLFARAGTPYCPDHNLPLQSQTISQMVDAALALPEDTR LMVLGPLARNKKGEFAELFAQMQAQGYVRFRIDGKIHESHSLPALEKNERHDIDVVIDRL KVRADAQQRLAESFEAALRAGGADAGGRVIALEMDSGKEHLFSAKFACPLCSYSLPELEP RLFSFNSPMGACPGCDGLGCTESFDPERVVAFPTLSLASGAVKGWDRRNGYYFSMLESVA RHYGTDVELPFEELPEKVRHVVLWGSGEEEMPFSYVFDSGARKGESMVKSHPFEGIIPNI TRRWRETESSVVRDDLARLRSVAVCPDCGGTRLRREARFVRIGEGEQARAIYEVGHATLA EAHAWCASLQLSGAKAEIAGKVVREIASRLLFLNDVGLSYLSLERGADTLSGGEAQRIRL ASQIGSGLTGVMYVLDEPSIGLHQRDNDKLIGTLQHLRDIGNSVIVVEHDEDMMRAADQI IDLGPGAGVHGGRVMAQGSYEEVRANPDSPTGRYLAGTQRIDVPARRTPWQPVLEATAEG EARPAAKGFPARAQQPPANPDNATAPGAPQLQALRVVGARGHNLKGVTADFPVGLLTCVT GVSGSGKSTLVNDTLYTEAARQIHRAGGEAAPHDDIIGMGHFDKVINVDQSPIGRTPRSN PATYTGLFTPIRDLMAETNTAKERGYGPGRFSFNVAGGRCEACQGDGVVKVEMHFLPDVY VPCDICNGQRYNRETLEVQWKGRNISQILEMTVEDAHAFFKDVPTIARKLQTLLDVGLSY IRLGQSATTLSGGEAQRVKLAQELSKRDTGRTLYILDEPTTGLHFADIALLLKVLQQLRD AGNTIVVIEHNLDVIKTADWIIDMGPEGGSGGGQVVATGTPEDVAANPASHTGRYLRPYL EAASAPAQAKPGRKNAK NT seq 3114 nt NT seq  +upstreamnt  +downstreamnt atgcctggttcccacacgatttccgaagacggcggcctggaccgggccgccgactcccgc tcccagcccgacggccgctaccttggcttggcgctggcgcagtcacgcatcgccatccgc ggtgcgcgcacgcacaacctcaagaacatcgacctggacattccgcgcaaccggctggtg gtgatcaccgggctgtcgggctcgggcaagtccagcctggccttcgacacgctgtatgcc gagggccagcgccgctatgtggagagcctgtcggcctatgcgcgccagttcctggggcgg ttggacaagcccgatgtggacctgatcgagggcctgtcgcccgccatcagcatcgaacag aaggccaccagccacaacccgcgctccaccgtgggcacggtgaccgagatcaacgactac ctgcgcctgctgttcgcacgcgccggcacgccctactgccccgaccacaacctgccgctg cagtcccagaccatcagccagatggtggatgcggccctggccctgcccgaggacacgcgc ctcatggtgctggggccgctggcgcgcaacaagaagggcgagttcgccgagctgttcgcg cagatgcaggcccagggctatgtgcgctttcgcatcgacggcaagatccatgagtcccat tccctgcccgcgctggagaagaacgagcgccacgacatcgacgtggtgatcgaccgcctc aaggtgcgcgccgacgcccagcagcgcctggccgagagcttcgaggccgccctgcgcgcg ggtggcgccgacgccggcggccgcgtgatcgccctggagatggacagcggcaaggaacac ctcttcagcgccaagttcgcctgcccgctgtgcagctattcgctgcccgagctggagccg cgcctgttctcgttcaactcgcccatgggcgcctgcccgggctgcgacggcctgggctgc acggagtccttcgaccccgagcgcgtggtcgccttccccacgctgagcctggccagtggc gccgtcaagggctgggaccggcgcaacggctactacttctccatgctggagagcgtggcg cgccactacggcaccgatgtggagctgcccttcgaggagctgcccgagaaggtgcgccat gtggtgctctggggctcgggcgaggaggaaatgcccttcagctacgtcttcgacagcggc gcgcgcaagggcgagtccatggtcaagagccatcccttcgagggcatcattcccaacatc acgcggcgctggcgcgagaccgagtccagcgtggtgcgcgatgatctggcgcggctgcgc agcgtcgccgtctgccccgactgcggcggcacgcggctgcgccgcgaggcgcgcttcgtg cgcatcggcgagggcgagcaggcccgcgccatctacgaagtgggccatgccacgctggcc gaggcccatgcctggtgcgcgtccctgcagctgtcgggcgccaaggccgagatcgcgggc aaggtggtgcgcgagatcgcctcgcgcctgctgttcctcaacgacgtgggcctgagctac ctgagcctggagcgcggcgcggacaccctgtccggcggcgaggcccagcgcatccgcctg gccagccagatcggcagcggcctgacgggcgtgatgtatgtgctggacgagcccagcatc ggattgcaccagcgcgacaacgacaagctcatcggcacgctgcagcacctgcgcgacatc ggcaacagcgtcatcgtggtcgagcacgacgaggacatgatgcgcgcggccgaccagatc atcgacctggggcccggcgcgggcgtgcatggcggccgcgtcatggcccagggcagctac gaagaggtgcgcgccaatcccgattcacccacgggccgctacctggcgggcacccagcgc atcgacgtgcctgcgcggcgcacgccctggcaacccgtgctggaggcaacggccgagggc gaggcccggccagcggccaagggctttccggcccgcgcccagcagccccccgccaatccc gacaacgcaaccgcccccggcgcgccgcaactgcaggccctgcgcgtggtgggcgcacgc ggccacaacctcaagggcgtgacggcggactttcccgtgggcctgctgacctgcgtgacc ggcgtctcgggctcgggcaagagcacgctggtcaacgacacgctctataccgaggcggca cgccagatccaccgcgccggcggcgaggctgcgccgcacgacgacatcatcggcatgggc catttcgacaaggtcatcaatgtggaccagtcgcccataggccgcacgccgcgcagcaac ccggccacctacacgggcctgttcacgcccatccgcgacctgatggccgagaccaacacc gccaaggagcgcggctacggccccgggcgcttctcgttcaacgtggccggcggccgctgc gaggcctgccagggcgatggcgtggtcaaggtggagatgcacttcctgcccgacgtctac gtgccctgcgacatctgcaacggccagcgctacaaccgcgagacgctggaggtgcagtgg aagggccgcaacatctcccagatcctggagatgacggtggaggacgcccatgccttcttc aaggacgtgcccaccatcgcccgcaagctgcagaccctgctggacgtgggcctgtcctat atccgcctgggccagagcgcgaccacgctgtcgggcggcgaggcgcagcgcgtcaagctg gcccaggagctgtccaagcgcgacacggggcgcacgctctacatcctggacgagcccacg acgggcctgcacttcgccgacatcgccctgctgctcaaggtgctgcagcagctgcgcgat gcgggcaacaccatcgtggtcatcgagcacaacctggacgtgatcaagacggccgactgg atcatcgacatgggccccgaaggcggctctggcggcggtcaggtggtggccacgggcacg cccgaggacgtggcggccaacccggccagccatacggggcgctatctgcggccctacctg gaggcagcgtcggctcccgcgcaggccaagccaggccgcaagaacgcaaagtga

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