Delftia sp. HK171: BO996_04540
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Entry
BO996_04540 CDS
T04584
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dhk
Delftia sp. HK171
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhk03400
]
BO996_04540
DNA repair and recombination proteins [BR:
dhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BO996_04540
Archaeal homologous recombinant proteins
BO996_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
nSTAND3
Mod_r
RsgA_GTPase
AAA_15
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
APE47168
LinkDB
All DBs
Position
complement(1013554..1017051)
Genome browser
AA seq
1165 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWRIDFTQAPFAGNGLFAITGATGAGKSTLLDAICLALYHQTPR
LNNISASANDLMTRHTADCLAEVEFEVKGQVYRAFWSQRRARDRLDGALQAPKVELARGD
GSILSSQTRDKLEQTAAITGLDFERFTKSMLLAQGGFAAFLEANANVRAGLLEELTGTEI
YGLISQKVFERARDARQRLDQLKAQADGVELLTPEARDALQAQADSLVTEQAALQADYLR
TQAQHQWQQQLAQATQTLQAARTGCADAAQALEQATPELESLAHDEPAQALQPLHQVWQR
STVACDDSRQQLQQLREHEQQTQARLLLQHRHAQALSARLAQAAQDTLARQQAEHQTLEQ
FCTHHAAHALLGERLGSWRQQFKLRASQQQQAASQQQALRKLDAEQARMAQSAEAGAAQV
QAATDAQARASATLQHAQDEQAQRLQGSGGMAELRAREQAEQDRLHLWRQAETQAAQRRE
LARQRQTLARELREGTALAQQQTDTWQALRTRYIDVREQVRDKQKLLAQEQRIQSLSEHR
HALQPGQPCPLCGAHEHPAVAAYEALDASATEAALRRKQDELDALQTQGETARATLAATT
AAQAARQRQADGLEQDIARWHDTWNDTWQGLTQPLQLAPDSWQQADTLAASAQACARQLD
TLKRAVQAAEQGEQAVQQAKDAAQHSRQSLQTAQGQLALQQQALADHSARREELQQSIAG
LQAEAQALNAQLQASLGEAGHTLPDDAQPWLEAREAEWQHWQQARHDLQQLAQSMALQRK
ECEAAEADAQRWKKQSETQWEAQWEGQRTAQPHPADTAVAEPPSLPLPPVEQLPQALAEC
ANDIAALTRQQDALQGQQQQAQATLARQREEAAQAESAWQAALAASPFADESTYLQALLP
APERQRLATLRQQLQAAQQRVATLLEAAQREHAQLQAQALTDLAPEAIQALLQTLQERHT
ALSEQLGGARTQLADDQRRRQGQQALFEHIAAQASDSDLWQHLDGLIGSAKGDKYRRFAQ
GLTLDHLLHLANLHLARLHGRYLLRRKPEGELELDIVDSWQGDTPRDTRTLSGGEAFLVS
LALALALSDLVSHKTSIDSLFLDEGFGTLDADTLEIALDALDRLNDSGKMIGIISHVEAL
KERIAVQVRVEKGGGVGHSRLVVSS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccttacgctgcggctcaagaacctcaactcgctcaagggcgaatggcgcatc
gatttcacgcaggcaccgttcgcgggcaacggcctgttcgccatcaccggggccacgggc
gcgggcaagtccaccctgctcgatgccatctgcctggcgctgtaccaccagacacccagg
ctgaacaacatctcggcatcggccaacgacctcatgacgcgccacacggccgactgtctg
gccgaggtcgagttcgaggtcaaggggcaggtctaccgtgccttctggagccagcgccgc
gcacgcgacaggctcgatggcgcgctgcaggcgcccaaggtggaactggcccggggcgac
ggcagcatcctcagcagccagacgcgcgacaagctggagcagaccgccgccatcaccggc
ctggacttcgagcgcttcaccaagtccatgctgctggcccagggcggctttgcggcgttc
cttgaagccaatgccaacgtccgcgccggcctgctggaagagctgacaggcaccgagatc
tacggcctcatctcgcagaaagtcttcgaacgcgcccgcgatgcgcgccagcgcctggac
cagctcaaggcccaggccgatggcgtggagttgctgacgcccgaggcgcgcgatgccctg
caggcccaggccgacagccttgtgacggagcaggccgcgctgcaggccgactacctgcgc
acccaggcccagcaccaatggcagcagcaactggcccaggccacccagacactgcaggcc
gcccgcaccggctgcgcagacgccgcccaggcactggagcaggccacgcccgaactggaa
agcctggcccatgacgagcccgcgcaggcgctgcagccgctgcaccaagtctggcagcgc
agcaccgtcgcctgcgatgacagccgccagcaactgcagcaactgcgcgagcacgaacag
cagacccaggcccggctgctgctgcagcaccgccatgcccaggccctgtccgcccgcctg
gcccaggctgcgcaagacaccctggcccgccagcaggccgagcaccaaacgctggaacag
ttctgcacccaccatgcagcccatgccctgctgggcgagcgcctgggcagctggcgccag
cagttcaagctgcgcgccagccagcaacagcaagcggccagccagcagcaggccctgcgc
aagctggatgccgaacaggcccgcatggcgcaaagcgccgaagccggcgcggcccaggtc
caggccgccaccgacgcacaggcccgcgccagcgccacactccagcacgcacaggacgaa
caggcgcagcgccttcaaggcagcggcggcatggccgagctgcgcgcgcgcgagcaggca
gagcaggaccgcctgcacctgtggcgccaggcagaaacccaggccgcgcagcgccgcgaa
cttgcgcgccagcgacagacactggcccgggaattgcgcgaaggaacagcactggcgcag
cagcagacggacacctggcaagccctgcgcacgcgctacatagacgtgcgagaacaggtc
cgcgacaagcaaaaactgctggcccaggagcagcgcatccaaagcctgtccgagcaccgc
cacgccctgcagcccggccagccctgcccgctgtgcggcgcgcacgagcacccggccgtg
gccgcctacgaagcgctggacgcctcggccaccgaagccgcgctgcgccgcaagcaggat
gaactcgacgccctgcaaacccagggcgaaaccgcccgcgccacgctggccgccaccacg
gccgcgcaggctgcacgccagcgccaggccgacggactggaacaggacatcgcacgctgg
cacgacacatggaacgacacatggcagggcctcacgcaacccctgcagctcgcgccagac
agttggcaacaggccgacaccctcgccgcatcggcccaggcctgcgcccgccagctggac
acgctcaagcgcgccgtgcaggccgccgagcaaggcgagcaggccgtgcaacaggccaag
gacgctgcccagcacagccgccagtcactgcagaccgcgcaaggccagcttgcgctgcag
cagcaggccctggccgaccacagcgcacgccgcgaagaactgcagcaatccatcgccggc
ctgcaggccgaagcccaggcgctgaacgcgcagttgcaggcctcactcggcgaggccggc
cacaccctgcccgacgacgcccagccctggcttgaagcgcgcgaagccgaatggcagcac
tggcaacaggcccggcacgacctgcagcaactggcccaatccatggccttgcagcgcaag
gaatgcgaggcggccgaggccgatgcgcagcgctggaaaaaacagtcggaaacacagtgg
gaggcacagtgggaggggcagagaacggcgcagccccatcccgccgatacggctgtggca
gagccgccttcactgcccttgccgcccgtggaacagctgccgcaggccctggccgaatgc
gccaacgacatcgccgctctcacgcgccagcaggatgccctgcaaggccagcagcaacag
gcccaggccacgctggcccgccagcgcgaggaagcggcccaggccgaatccgcatggcag
gccgccctggccgccagcccctttgctgacgaatccacctacctgcaggccctgctgccc
gcacccgaacgccagcgcctggccacgctgcgccagcaactgcaggcggcacaacagcgc
gtggccaccctgctggaagccgcgcagcgcgagcacgcgcaactgcaggcccaggccctg
accgacctggcacccgaagccatacaggccctgctgcaaacactgcaggagcgccatacg
gcactcagcgaacaactgggcggcgcccgcacccagctggccgacgaccagcgccgccgc
cagggccagcaggccctgttcgagcacatcgccgcccaggccagcgacagcgacctgtgg
cagcacttggacggcctcatcggctcggccaagggcgacaaataccggcgcttcgcccag
ggcctcaccctggaccacctgctgcacctggccaacctccacctggcacgcctgcacggc
cgctacctgctgcgccgcaagcccgaaggcgagctggaactggacatcgtcgacagctgg
cagggcgacaccccgcgcgacacgcgcacgctatcgggcggcgaggccttcctcgtcagc
ctggccctggccctggcgctgtccgacctggtcagccacaagacctccatcgactccctg
ttcctcgacgaaggcttcggcacgctcgatgccgacacgctggagatcgcgctcgacgca
ctcgaccggctcaacgacagcggcaagatgatcggcatcatcagccacgtggaggcgctc
aaggagcgcatcgccgtgcaggtgcgggtggagaaaggcggtggcgtggggcattcgagg
ctggtggtttcttcgtga
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