Delftia sp. HK171: BO996_07555
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Entry
BO996_07555 CDS
T04584
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dhk
Delftia sp. HK171
Pathway
dhk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BO996_07555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dhk02022
]
BO996_07555
02035 Bacterial motility proteins [BR:
dhk02035
]
BO996_07555
Two-component system [BR:
dhk02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
BO996_07555
Bacterial motility proteins [BR:
dhk02035
]
Pilus system
Twitching motility proteins
BO996_07555
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_23
AAA
HTH_28
AAA_16
PDE8A_N
HTH_30
HTH_24
HTH_Mga
AAA_2
VpsR
Motif
Other DBs
NCBI-ProteinID:
APE47722
LinkDB
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Position
complement(1689607..1691154)
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AA seq
515 aa
AA seq
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MPLNSLPAAASILVVDDEPDLRTLYELTLLREGYRVETAASVGEAREQLQTQRFDVVITD
MRLPDGMGMELLQDLRSQQRRERCVVMTAYGSAENAVEALRSGAFDYLTKPVDLKQFRLV
VASAAQGVGGVPAPGVMPARNPSAAPAASPVLNGSGALDAMVGESPAMQAVKQRIAKVAR
GMAPVLVHGESGTGKELVARALHACSQRAHGPMVAVNCGAIPENLLEAEFFGARKGSYTG
ATQDRDGYFQAARGGTLFLDEIGDLPLAMQAKLLRAIQERRVRPLGSAQEEAADVRIVSA
THRDLAADVQQGRFRQDLYYRLNVIEVLLPPLRERREDLPALCRALLARLSQESGLPMPE
IDERSVQQIARLPLPGNVRELENLLHRAITLGEDGPLRIDPEMQLPCGTPPAPPAPPASA
SPSSSLSPSRPLPLGGPLSPEPADADLPRDLQAWLDERERGILVQALQENGFNRTATAAR
LGLSLRQIRYRIDRLNIALPGDASAETDGGGHGEA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgaactccctgcccgctgccgcatcgatccttgtcgtggacgacgagccggat
ctgcgcaccctctatgaactgacccttctgcgcgaaggctaccgcgtggaaaccgccgcc
agcgtgggcgaggcgcgcgagcaactgcagacccagcgcttcgacgtggtcatcaccgac
atgcgcctgcccgacggcatgggcatggagctgctgcaggacctgcgcagccagcagcgg
cgcgagcgctgcgtggtcatgacggcctacggctccgccgagaacgccgtcgaggccctg
cgctcaggcgccttcgactacctgaccaagcccgtggacctcaagcagttccgcctggtc
gtggcctcggccgcccagggcgtgggcggtgtgccggccccgggcgtgatgccggcgcgc
aacccttcggccgctcccgccgccagtccggtcctcaacggcagcggcgcactggacgcc
atggtcggcgagtcgcccgccatgcaggccgtcaagcagcgcattgccaaggtggcccgc
ggcatggcgccggtgctggtgcatggcgagtcgggcacgggcaaggagctggtggcccgc
gcgctgcatgcctgcagccagcgtgcccatggccccatggtggccgtgaactgcggcgcc
attcccgaaaacctgctggaggccgagttcttcggcgcgcgcaagggctcctataccggc
gccacccaggaccgcgacggctacttccaggctgcgcgcggcggcaccttgtttctggac
gagatcggcgacctgcccctggccatgcaggccaagctgctgcgcgccatccaggagcgc
cgcgtgcgccccctgggctccgcacaggaggaagcggccgatgtacgcatcgtcagcgcc
acccaccgcgatctggctgccgatgtgcagcaggggcgcttccggcaggacctgtactac
cgcctcaatgtcatcgaggtactgctgcccccgctgcgcgagcgccgcgaagacctgcct
gccctgtgccgcgccctgctggcacggctgtcgcaggaatccggcctgcccatgcccgag
atcgacgagcgttcagtgcagcagatcgcccgcctgcccctgcccggcaatgtgcgtgaa
ctggagaacctgctgcatcgcgccatcacgctgggtgaggacgggccgctgcgcatagat
cccgagatgcagctgccctgcggcacgccgcccgcaccgcccgcaccacccgcatccgcc
tcgccctcttcttcgctctcgccttcgcgccccctgccgctaggcggcccgctatcgcca
gagccagccgatgccgacctgccccgtgacctgcaggcctggctggacgagcgcgagcgc
ggcatcctggtgcaggcgctgcaggaaaacggcttcaaccgcacggccaccgccgcgcgc
ctgggcctgagcctgcgccagatccgctaccgcatcgaccggctgaacatcgccctgccc
ggcgatgccagcgccgagacggacggaggcggccatggcgaggcctga
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