Delftia sp. HK171: BO996_09705
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Entry
BO996_09705 CDS
T04584
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
dhk
Delftia sp. HK171
Pathway
dhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BO996_09705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dhk02000
]
BO996_09705
Transporters [BR:
dhk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
BO996_09705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
APE51552
LinkDB
All DBs
Position
complement(2158059..2159249)
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AA seq
396 aa
AA seq
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MRKNDPELRVLGTSVTLTEALRQRAQQDLGIRIHFEVLDGFDAQRQAVMRQDSFDLYDQW
FHSVDFLWPTGTLQPIDTARLTCWDEVNALPRTGRITPQAAFGAGCNPVTRLYVQADGSV
SDVPSAHISMLPLTHNVDSFVYLPAALPALFDQAEESWSWLVSPACRGRAALQADAAIGA
LDAALALQASGDMRFGDISNLGLEEIDRMMAVLLQRQESEQFRGFWGNYADAARLMIDAG
VAIQSHWSPAMGHYRAAGLDYRLACPREGYRAWYGGLGISSQARGDTLDAAYRYLNWWQS
GWPGAAMARQGYYISNPLRTREHLSASEWDYWYAGLPAAEDLQGTDGQLVVPRGSVRDGG
SYEQRLGRIAVWNTVMDEHNYLVRQWATLLRRARAL
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagaacgatcccgaactgcgtgtcctcggcacctcggtgacgctgaccgaagcc
ctgcgccaacgtgcgcagcaggacctgggcatacgcatccatttcgaggtgctggacggc
ttcgacgcccagcgccaggccgtgatgcgccaggacagcttcgacctgtacgaccagtgg
ttccacagcgtggatttcctgtggcccaccggcaccctgcagcccatcgacacggcgcgc
ctgacctgttgggacgaggtcaacgccctgccccgcaccggccgcatcacgccgcaggcg
gcctttggcgcgggctgcaatcctgtcacgcgcctgtatgtgcaggccgatggcagcgtc
agcgatgtgcccagtgcgcatatctccatgctgccgctcacgcacaacgtcgacagcttt
gtctacctgcccgccgccctgcccgcgctgttcgaccaggccgaggaaagctggtcctgg
ctggtctcccccgcctgccgagggcgcgctgcgctgcaggccgatgccgccatcggcgca
ctggacgcggcccttgccctgcaggccagcggtgacatgcgtttcggcgacatcagcaac
ctggggctggaggaaatcgaccggatgatggccgtgctgctgcagcggcaggagtccgag
cagttcaggggcttctggggcaactacgccgatgcggcacggctgatgatcgatgcaggc
gttgccatccagagccactggtcgccagccatgggccactaccgcgcagcggggctggac
taccggctggcctgtccgcgcgaaggctaccgcgcctggtacggcggcctgggcatctcc
agccaggccaggggcgacacgctggatgccgcctaccgctacctgaactggtggcaatcc
ggctggcccggtgccgcgatggcgcggcagggctactacatctccaacccgctgcgcacg
cgcgagcacctgagcgccagcgaatgggactactggtacgccggcctgcctgccgccgaa
gacctgcagggcaccgacggccagctcgtggtcccgcgcggcagcgtgcgcgacggcggc
tcctacgagcagcgcctgggccgcatcgccgtctggaacaccgtcatggacgagcacaac
tacctggtgcgccagtgggccacgctgctgcgccgtgcgcgcgccttatag
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