Delftia sp. HK171: BO996_15825
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Entry
BO996_15825 CDS
T04584
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dhk
Delftia sp. HK171
Pathway
dhk03030
DNA replication
dhk03430
Mismatch repair
dhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BO996_15825
03430 Mismatch repair
BO996_15825
03440 Homologous recombination
BO996_15825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhk03032
]
BO996_15825
03400 DNA repair and recombination proteins [BR:
dhk03400
]
BO996_15825
Enzymes [BR:
dhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BO996_15825
DNA replication proteins [BR:
dhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BO996_15825
DNA repair and recombination proteins [BR:
dhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BO996_15825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
APE49203
LinkDB
All DBs
Position
3553459..3556992
Genome browser
AA seq
1177 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTNRINAIVKAAAEDGQVALAVTDFNNLFGGVKFYREGRAKGVKP
VLGAEIQIEGENGAAVSRIIVLVQSPLGYHNLSELLARGWTRNVVKGQAVHTWAWLQELG
EGLIVLAGAQAGPVGQALMRGDEAGAAAVAQRLAGMFPHRFFIELQRAGRQDDEAHVLAA
VQLAERLNLPVVATHPIQFFGPDDYESHEARVCIAEGEILANPKRVRRFTRDQHFKTAAQ
MQALFADIPSAIANTVEIARRCSLTLVLGKPQLPNFPVPDGMTMDEFFRSESFNGLEDRL
THLYPDPAKREAQRPRYVERLEFEIGTILKMGFPGYFLIVGDFIKWAKLNGCPVGPGRGS
GAGSLVAYVLKITDLDPLEYNLLFERFLNPERVSMPDFDVDFCQANRDRVIDYVKQLYGR
DAVSQIATFGTMAARAAIRDVGRVLDMSYTFCDGISKLIPNKPGLHVTLKYPPNPKKEGD
KYTYAIEAEPMLAERIEKEEDVKTLIEMAQKLEGMTRNIGMHAGGVVIAPGKLADFCPLY
QQPGSDSAVAMYDKDDVEAVGLVKFDFLGLATLTILEIAREFIIKRHKGQENFAFENIPL
DDARTYHLFSEGKTEAVFQFESRGMQGMLRDAKPSRLEDLIALNALYRPGPMDLIPSFVA
RKHGKEVVEYPHPLVEQVLAETYGIMVYQEQVMQTAQVLGGYSLGGADLLRRAMGKKKVE
EMVMHRGIFREGAAKQGISEDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTAWLKVHY
TAEFYCGNMTVEMDNTDKLKVLYEDALKMGISFEPPDVNRGMYRFEPVTDKVIRYGLGAI
KGTGQQAIEAIVAAREGRGVGPRGADKGPFKSLADFCVRVDRTRLNKRTLEALIKGGAFD
AIELNRASLVASIDHAFEFGNKTLANANQGGLFDMMGDDAVGSSTQEPPLVEALPWGVKE
RLTQEKTAVGFYLSGHLFDEVEKEVRRFVRTPLAELRDSREPQTLAGIISDFRAINGQRG
RLGLFKIDDGSGVIEASVDENTLNTYRELLKDDEFVVITGRLQLDHFSGGLRMKAQQLWN
LADARCRFARYLQVSVGEKMPDVLGLLRQFPAVVEQGEHGELQRGMKVRLGLVCEDERGS
ASCELALGDASRFYPSDAALAAWYAQAGSAQVKVVYE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtccatttgcgcctgcacaccgaattctccgtcgtggacggaaccaaccgcatc
aatgccatcgtcaaggccgccgccgaggatgggcaggtcgcactggccgtcacagacttc
aacaacctgtttggcggcgtcaagttctaccgcgaagggcgggccaagggcgtcaagccc
gtgctgggcgcggaaatccagatcgaaggcgagaacggcgccgccgtctcgcgcatcatc
gtgctggtgcaaagcccgctgggctaccacaacctgtccgaactgctggcccgtggctgg
acccgcaacgtggtcaagggccaggccgtgcacacctgggcctggctgcaggagctgggc
gaggggctgatcgtgctggccggtgcccaggccggccccgtgggccaggcgctgatgcgc
ggcgacgaggccggcgcagccgccgtggcccagcggctggcaggcatgttcccgcaccgc
ttcttcatcgaactgcagcgcgccggccgccaggacgatgaggcgcacgtgctggctgcc
gtgcaactggccgagcggctgaacctgcccgtggtggccacgcaccccatccagttcttc
ggccccgacgactacgagtcccacgaagcgcgcgtgtgcatcgccgagggtgagatcctg
gccaacccgaagcgcgtgcgccgcttcacgcgcgaccagcatttcaagaccgccgcgcag
atgcaggcgctgttcgccgacattcccagcgccattgccaacaccgtggaaatcgcgcgc
cgctgcagcctgaccctggtgctgggcaagccgcagctgcccaatttccccgtgcctgac
ggcatgaccatggacgagttcttccgcagcgaatccttcaacggcctggaagaccgcctg
acccatctgtatcccgatcccgccaagcgcgaggcgcagcgcccgcgctacgtggaacgg
ctggaattcgagatcggcaccatcctcaagatgggctttccgggctacttcctcatcgtg
ggcgacttcatcaagtgggccaagctcaacggctgccccgtggggccgggccgcggatcg
ggcgcgggctcgctggtggcctacgtgctcaagatcacggacctggacccgctggaatac
aacctgctgttcgagcgcttcctgaaccccgagcgcgtgtccatgcccgacttcgacgtg
gacttctgccaggccaaccgcgaccgcgtcatcgactatgtgaagcagctctacggccgc
gacgccgtcagccagatcgccaccttcggcaccatggccgcgcgcgcggccatccgcgac
gtgggccgcgtgctggacatgagctacaccttctgcgacggcatctccaagctcattccc
aacaagccgggcctgcacgtcacgctcaaatacccgcccaatccgaagaaggagggcgac
aagtacacctacgccatcgaggccgagcccatgctggccgagcgcatcgaaaaagaagaa
gacgtcaagaccctgatcgaaatggcccagaagctcgaaggcatgactcgcaacatcggc
atgcacgcgggcggcgtggtgatcgctccgggcaagctcgccgacttctgcccgctgtac
cagcagccgggcagcgactcggccgtggccatgtacgacaaggacgatgtggaggccgtg
ggcctggtgaagttcgactttctgggcctggccacgctgaccatcctggagatcgcgcgc
gagttcatcatcaagcgccacaagggccaggagaacttcgccttcgagaacatcccgctg
gacgatgcgcgcacttaccacctgttctccgagggcaagaccgaagccgtgttccagttt
gaatcgcgcggcatgcagggcatgctgcgcgacgccaagcccagccgcctggaagacctg
atcgcactgaacgcgctgtaccgcccgggccccatggacctgatccccagcttcgtcgcg
cgcaagcacggcaaggaagtggtggagtacccgcacccgctggtcgagcaggtgctggcc
gagacctacggcatcatggtctaccaggagcaggtgatgcagaccgcccaggtgctgggc
ggctattcgctgggcggcgccgacctcttgcgccgagccatgggcaagaagaaggtcgag
gaaatggtcatgcaccgcgggatattccgcgagggcgcggccaagcagggcatcagcgag
gacaaggccgacgaggtcttcgacctgatggagaagttcgcaggctacggcttcaacaag
tcgcacgccgccgcctactcgctgctggcctaccacacggcctggctcaaggtgcactac
acggccgagttctactgcgggaacatgaccgtggaaatggacaacaccgacaagctcaag
gtgttgtacgaggacgcgctcaagatgggcattagcttcgagccgccggatgtcaaccgc
ggcatgtaccgtttcgagcccgtcaccgacaaggtcatccgctacggcctgggcgccatc
aagggcacgggccagcaggccatcgaggccatcgttgcggcgcgtgaaggccgcggcgtg
gggccgcgcggcgccgacaagggacctttcaagagcctggccgacttctgcgtgcgcgtg
gaccgcacgcgcctgaacaagcgcacgctggaagccctgatcaagggcggcgccttcgac
gccatcgagctcaaccgggcgtcgctggtggcctccatcgaccatgccttcgagttcggc
aacaagacgctggccaacgccaaccagggcggcctgttcgacatgatgggcgatgacgcc
gtgggctccagcacccaggagccgccgctggtcgaggcactgccctggggcgtgaaggag
cggctgacccaggaaaagacggcggtgggcttctacctctcgggccacctgttcgacgag
gtcgagaaagaggtgcgccgcttcgtgcgcacgcccctggccgagctgcgcgacagccgc
gagccccagacgctggccggcatcatcagcgacttccgcgccatcaacggccagcgaggg
cggctgggcctgttcaagattgacgatggctcgggcgtgatcgaggcctcggtggacgag
aacacgctcaacacctaccgcgaactgctcaaggacgatgaattcgtcgtcatcaccggg
cgcctgcagctcgaccatttcagcggcggcctgcgcatgaaggcccagcagctgtggaat
ctggcagacgcgcgctgccgctttgcgcgctacctgcaggtcagcgtgggcgagaagatg
cctgacgtgcttggcctgctgcgccagttccccgccgtggtggagcagggcgagcacggc
gagctgcagcgcggcatgaaagtgcgcctggggctggtctgcgaggacgagcgcggctcg
gccagctgtgagctggcgttgggcgatgcaagccgcttctatcccagcgatgcggccctg
gcggcctggtacgcccaggccggcagtgcccaggtcaaggtggtctacgaataa
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