Delftia sp. HK171: BO996_16670
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Entry
BO996_16670 CDS
T04584
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
dhk
Delftia sp. HK171
Pathway
dhk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BO996_16670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhk03021
]
BO996_16670
Transcription machinery [BR:
dhk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BO996_16670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_11
HTH_20
HTH_IclR
DUF6362
HTH_24
HTH_29
DUF8658
HTH_Tnp_4
DUF3080
HTH_40
HTH_28
Motif
Other DBs
NCBI-ProteinID:
APE49354
LinkDB
All DBs
Position
complement(3759308..3759838)
Genome browser
AA seq
176 aa
AA seq
DB search
MDAQISQSAKAATSVESLYHSHQNWLQGWLRRRLGDSFDAADMAQDVFMRLLTRQPGPDA
TGLRQPRAYLSTIAHGLLVDHWRRRELERAWQETLALMPEAQAPSPESRLIFLETLVAID
RMLDALKPRVRSAFLWAQLEGLTCPQIAERLGVSLATAERYIATALRHCYALRFGA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcagatttcccagtccgccaaggcggcaaccagcgtggaaagcctgtaccac
agccaccagaactggctgcagggctggttgcggcgccggttgggcgactccttcgacgcg
gccgacatggcgcaggacgtgttcatgcgcctgctcacccgccaacccggccctgacgca
accggcctgcgccagccccgcgcctacttgagcaccattgcccatggcctgctggtggac
cactggcgccgccgcgagctggaacgtgcctggcaggaaaccctggccctcatgcccgag
gcgcaggccccctcgccggaaagccggctgatcttcctggaaaccctggtcgccatagac
cgcatgctggatgccttgaagccccgcgtgcgcagcgcctttctgtgggcgcaactggaa
gggctcacctgcccgcagatcgccgaacgactgggcgtgtccctggccacggccgagcgc
tacatcgccacggccctgcgccattgctacgcactgcgcttcggggcatga
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