Delftia sp. HK171: BO996_20320
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Entry
BO996_20320 CDS
T04584
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
dhk
Delftia sp. HK171
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dhk03009
]
BO996_20320
Enzymes [BR:
dhk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
BO996_20320
Ribosome biogenesis [BR:
dhk03009
]
Prokaryotic type
rRNA helicases
BO996_20320
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
APE50007
LinkDB
All DBs
Position
complement(4579827..4581227)
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AA seq
466 aa
AA seq
DB search
MTPPSASSNSFDKLALSPATLANLERLGYLEMTAIQLASLPPALEGKDVIAQAKTGSGKT
AAFALALLAKLDTRNFSVQGLVLCPTRELADQVTTEIRRLARAEDNVKVVTLSGGVPLRG
QNASLENGAHVIVGTPGRVIDHLDRGNLNLDSLNTLVLDEADRMLDMGFVDDIAKVAKQC
PPQRQTLLFSATYPEGIAKLAARFMRDPVTVKVAAQHSGEQIEQRWYEVDKEERLPSVAR
LLEHFRPESTLAFCNTKARCRALAELLQAQGYSALELHGDLEQRDRDQVLVRFVNGSCSV
LVATDVAARGLDVTNLGAVINVDITPDPEVHVHRIGRTGRAGQKGLALSLATMDEMGAVG
NIEQMQGSPSVWYPLDELTPAPGGRLLPSKATIHINASRKDKIRPGDVLGALTADLGYTR
EQVGKIDINEFATYVAVDRKIAHDVVARLNSGKIKGRTVKARLLKD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgactcctccctcggcttcttccaattccttcgacaaacttgcgctttcgccggcaacg
ctcgccaatcttgagcggctcggctaccttgaaatgacggcgatccagctcgccagcctg
ccccctgcgcttgaaggcaaggatgtgatcgctcaggccaagaccggcagcggcaagacc
gcagcctttgccctggcgctgctggccaagctggatacgcgcaatttctcggtacaaggc
ctggtgctctgccccacccgcgagctggccgaccaggtgacgaccgagattcgccgcctg
gcgcgtgcggaagacaacgtcaaggtggtgaccctgtccggtggcgttccgctgcgcggc
cagaacgcgagccttgagaacggcgcgcacgtgatcgtcggcacgcccggccgtgtgatc
gatcacctggatcggggcaatctgaaccttgattcgctgaacaccttggtgctcgacgaa
gcggatcgcatgctcgacatgggtttcgtcgatgacatcgccaaagtcgccaagcagtgc
cccccgcagcgccagaccttgctgttctccgcaacctaccctgaaggcatcgccaagctg
gccgcgcgattcatgcgtgacccggtcacggtcaaagttgccgcgcagcacagtggcgag
cagatcgagcagcgctggtacgaggtggacaaggaagagcgcttgccctcggtggctcgc
ctgctggagcacttccggcccgagagcacgctggccttctgcaataccaaggcgcgctgc
cgggcccttgccgagctgctgcaggcccagggctacagcgcgctggagttgcacggcgat
ctggagcagcgtgatcgtgaccaggtgctggtgcgcttcgtgaacggcagttgctccgtg
ctggtcgccaccgatgtggcggctcgcgggctcgatgtgaccaatctgggcgccgtcatc
aacgtggacatcacgcccgaccctgaagtgcacgtgcaccgtatcggccgcacaggccgc
gccggccagaaaggtttggccctgagtcttgcgacgatggacgaaatgggcgcggtcgga
aacatcgaacagatgcagggcagcccatccgtctggtacccgctggacgagctgacaccg
gctcccggcggccggctcctgccatccaaggccaccatccacatcaatgccagccgcaag
gacaagatccgcccgggcgacgtgctgggtgcgctcaccgcagacctgggctacacccgc
gagcaagtgggcaagatcgacatcaacgagttcgcaacctatgtggccgtggaccgcaag
attgcgcatgacgtggttgcccggctcaatagcgggaagatcaaggggcgaacggtgaag
gcgcgcttgctcaaggactga
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