Delftia sp. HK171: BO996_21465
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Entry
BO996_21465 CDS
T04584
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
dhk
Delftia sp. HK171
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhk03032
]
BO996_21465
03036 Chromosome and associated proteins [BR:
dhk03036
]
BO996_21465
03400 DNA repair and recombination proteins [BR:
dhk03400
]
BO996_21465
DNA replication proteins [BR:
dhk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BO996_21465
Chromosome and associated proteins [BR:
dhk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BO996_21465
DNA repair and recombination proteins [BR:
dhk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BO996_21465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
NPFF
DUF2267
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
APE50215
LinkDB
All DBs
Position
4852407..4852748
Genome browser
AA seq
113 aa
AA seq
DB search
MTRSDLVEELAARFGQLSQRDAEQAVKTILDAVSDALVRGHRIEIRGFGSFSVNHRPPRM
GRNPRSGEAVHIPSKRVPHFKPGKALREAVDLRPGAAIDTDNTGSGTGTGPAA
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgacccgatccgatctcgtcgaagaactcgccgcccgctttggccaactgagccagcgc
gatgccgagcaggccgtcaagacgattcttgacgccgtcagcgatgccctggtgcgaggc
catcgcatcgaaatccgcggctttggcagtttctcggtcaaccatcgcccgccccgcatg
ggccgcaatccccgcagtggcgaggctgtccacattccgtccaagcgcgtgccgcacttc
aagcccggcaaggcccttcgcgaagccgtggacctgcgccccggcgcggccatcgataca
gacaacacaggctccggcacaggcaccggccctgccgcctga
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