Delftia sp. HK171: BO996_24710
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Entry
BO996_24710 CDS
T04584
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dhk
Delftia sp. HK171
Pathway
dhk03030
DNA replication
dhk03410
Base excision repair
dhk03420
Nucleotide excision repair
dhk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BO996_24710
03410 Base excision repair
BO996_24710
03420 Nucleotide excision repair
BO996_24710
03440 Homologous recombination
BO996_24710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhk03032
]
BO996_24710
03400 DNA repair and recombination proteins [BR:
dhk03400
]
BO996_24710
Enzymes [BR:
dhk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BO996_24710
DNA replication proteins [BR:
dhk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BO996_24710
DNA repair and recombination proteins [BR:
dhk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BO996_24710
NER (nucleotide excision repair)
GGR (global genome repair) factors
BO996_24710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
APE50792
LinkDB
All DBs
Position
complement(5616573..5619416)
Genome browser
AA seq
947 aa
AA seq
DB search
MSNSKTLVLIDGSSYLYRAYHAMPDLRAEPGNPESPATGAIRGMINMLQAIRKEVAADYA
VCVFDTSGPTFRDTLYPEYKAHRSPMPDDLRSQIEPIHEVVRLLGWPVLAIQGVEADDVI
GTLAKTAAAQGVNVVISSGDKDLSQLVDSHIMVMDTMSGKRRDVAGVTAEFGVPPTQMID
YQALVGDAVDNVPGVSKVGPKTAVKWLAEHGSLDGLIAAADGIKGVAGQNLRDAIASGQL
ALSRQLVTMKTDCDLSAEVPTLPVLDALAPREPDTAPLRDFYERYGFKGLARMLGGAAPE
PDALEAVKAGRKPAAKPRADQSTGDMFAQEQAESDEATTEAEAVQQRPLDYDVVLTWEAF
DQWLAKINAAELTALDTETTSLDEMRAEIVGISLSVEPGAAAYIPLRHAGPDAPEQLPAD
EVLQRLKPWLEDAARPKLGQHIKYDRHVFANAGIEVQGYVHDTMLQSYVLEVHRPHGLAS
LALRHTNRTGISYEDLCGKGAHQIPFAQVPVDKAAAYACEDADQTLDVHRVLWPQLQAND
GLRGVYELEIATSEALFRIERNGVLIDAATLAKQSNDLGQRIVQLEQEAYDIAGQPFNLA
SPKQLGEIFFDKLGMPVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYT
DKLAQLALPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFIAAPGHVI
ASADYSQIELRIMAHLSGDESLLRAFHEGRDVHRATASEVFNVELEQVSSEQRRYAKVIN
FGLIYGMSSFGLAKNLGIETKAAAAYIDRYFQRYPGVKRYMDETVEFARDHGYVETVFGR
RLYLVDINGGSGPRKKAAERQAINAPMQGTAADLIKKAMVAVQAELDARQSEVRVIMQVH
DELVFELPEGESDWVRTEIPRLMAGVADLKVPLLAEVGLGPNWDKAH
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagcaattccaagaccctggtgctgatcgacggctccagctacctctaccgcgcctac
cacgccatgccggacctgcgcgccgagcccggcaacccggaaagccccgccacgggcgcc
atccgcggcatgatcaacatgctccaggcgatcaggaaggaagtggcggccgactacgcc
gtctgcgtgttcgataccagcggacccaccttccgcgacacgctctaccccgaatacaag
gcgcaccgctcgcccatgcccgacgatctgcgctcgcagatcgagcccatccatgaagtg
gtccgcctgctgggctggcccgtgctggccatccagggcgtggaggccgacgacgtgatc
ggcaccctggccaagacggccgccgcccagggcgtgaacgtggtgatctccagtggcgac
aaggacctgtcccagctggtggactcccacatcatggtgatggacaccatgagcggcaag
cgccgcgacgtggccggcgtgacggccgagttcggcgtgccgcccacgcagatgatcgac
taccaggccctggtcggcgatgccgtggacaacgtgcccggcgtgtccaaggtgggcccc
aagacggccgtcaagtggctggccgagcacggctcgctcgacggcctgattgctgcggcc
gacggcatcaagggcgtggccggccagaacctgcgcgatgccatcgcctcgggccagctg
gcgctgagccgccagttggtcaccatgaagaccgactgcgacctgagcgccgaagtgccc
accctgccggtgctcgacgcgctggcgccgcgcgagcccgataccgcgccgctgcgcgac
ttctatgagcgctacggcttcaagggcctggcgcgcatgctcggcggtgccgcgcccgag
cccgatgcgctggaagccgtcaaggccggccgcaagccagcggccaagccgcgtgccgac
cagtccacgggcgacatgtttgcccaggagcaggccgaatccgacgaagccaccaccgag
gccgaggccgtccagcagcgcccgctggactatgacgtggtgctgacctgggaagcgttc
gaccagtggctggccaagatcaacgccgccgaactcacggccctggataccgaaaccacc
tcgctggacgagatgcgtgccgagatcgtgggcatctcgctgagcgtggagcccggcgcc
gctgcctacatccccctgcgccatgccggccccgacgcgcccgagcaactgccggccgac
gaagtgctgcagcgcctcaaaccctggctggaggatgcggcccggcccaagctgggccag
cacatcaagtacgaccgccatgtcttcgccaatgccggcatcgaggtgcagggctatgtg
cacgacaccatgctgcaaagctatgtgctggaagtgcaccgcccgcacggcctggccagc
ctggcgctgcgccacaccaaccgcacgggcatcagctatgaagacctgtgcggcaagggc
gcccaccagatcccgttcgcccaggtgcccgtggacaaggctgccgcctatgcctgcgag
gatgccgaccagaccctggacgtgcaccgcgtgctgtggccgcaactgcaggccaacgac
ggcctgcgcggcgtctacgagctggagatcgccaccagcgaggccctgttccgcatagag
cgcaacggcgtgctcatcgatgccgccacgctggccaagcagagcaacgacctgggccag
cgcatcgtgcagctggagcaggaggcctacgacatcgcgggccagcccttcaacctggcc
agccccaagcagctgggcgagatcttcttcgacaagctgggcatgcccgtggtcaagaag
acggccaccggcgcacgcagcaccgacgaagaggtgctggagaagctggccgaggactat
ccgctgcccgccaagctgctggagcaccgcagcctgtccaagctcaagggcacctatacc
gacaagctggcccagctggcgctgccgcgcacgggccgcgtgcacacgcactacgcccag
gccgtggccgtgacggggcgcctgtccagcaacgaccccaacctgcagaacatccccatc
cgcacgcccgaaggccggcgcgtgcgcgaggccttcattgccgcgcccggccatgtgatc
gccagcgccgactactcgcagatcgagctgcgcatcatggcccacctgtcgggcgacgag
tccctgctgcgcgccttccacgaaggccgcgacgtgcaccgtgccacggcatcggaagtc
ttcaacgtggagctggagcaggtcagcagcgagcagcgccgctatgccaaggtcatcaac
ttcgggctgatctacggcatgagcagctttggcctggccaagaacctgggcatagagacc
aaggccgcggccgcctacatcgaccgctatttccagcgctatccgggcgtcaagcgctac
atggacgagacggtggaattcgcgcgcgaccacggctacgtggaaaccgtcttcggccgc
cgcctgtacctggtggacatcaacggcggcagcggcccgcgcaagaaggcggccgaacgc
caggccatcaacgcgcccatgcagggcacggcggccgacctgatcaagaaggccatggtg
gcggtgcaggccgagctcgatgccaggcagtccgaggtccgcgtcatcatgcaggtgcac
gacgaactggtgttcgagctgcccgaaggcgagtcggactgggtgcgcacagaaatcccg
cgcctgatggccggcgtggccgacctgaaggtgccgctgctcgccgaggtgggcctggga
cccaactgggacaaggcacattga
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