Dermabacter hominis: CYJ49_000100
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Entry
CYJ49_000100 CDS
T09110
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dhm
Dermabacter hominis
Pathway
dhm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CYJ49_000100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhm03021
]
CYJ49_000100
Transcription machinery [BR:
dhm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CYJ49_000100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
WIK60815
LinkDB
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Position
22945..24480
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AA seq
511 aa
AA seq
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MSTSTSKKEEVTKNIEALASALDGATSVSYEALKASAKSLGISPYKVASLSNKLEETGIE
ILDRPSDSRKKKAASKSAGASKGDAADSVEASKSAPKRGKKAASKKDTSKKTASSAKSEP
EAETAEQDAPREKDGSEETESKASRKRAAKRTSAKKAGKRGTKKEDSAAEGSSGADDTDS
ADDDDPSKGFALTNDDDDSPAQQVVTAGATADPVKDYLKQIGKVALLNAVQEVELAERIE
AGLYAEHKLKQDPSLKKSIEGRDLELIVADGKAAKDHLLEANLRLVVSLAKRYTGRGMLF
LDLIQEGNLGLIRAVEKFDYAKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVIN
KLARVQRQMLQDLGREPLPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGD
LIEDSEAVVPADAVSFTLLQEQLHSVLDTLSERESGVVAMRFGLEDGQPKTLDEIGKVYG
VTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgacgagcacgtctaagaaagaagaagtcacgaagaacatcgaggccctcgcgtcg
gctctcgatggagcgacttcggtgagctacgaggccctcaaggcctccgccaagtccctc
ggtatctccccgtacaaggttgcatcgctctccaacaagctcgaggagaccgggatcgag
atcctcgaccgtccgagcgactcccgcaagaagaaggcagcctcgaagagcgccggcgcg
agtaagggcgatgccgctgattccgtcgaggcctcgaagagtgccccgaagcgcggcaag
aaagctgcgtcgaaaaaggacacctcgaaaaagaccgcttcgagtgcgaagagcgagccc
gaagcggagacggccgagcaagacgctcctcgtgaaaaggacggctccgaagaaacagaa
tcgaaggcctcgcgcaagagggctgccaagcgtacgtcggcgaagaaggccggcaaacgc
ggcaccaagaaagaagattctgctgcggaaggctccagcggcgcagacgacaccgactcc
gccgacgacgacgatccgagcaagggcttcgcgctcacgaacgacgatgatgattcgccg
gctcagcaggttgtgaccgccggcgccactgccgacccggtgaaggactacctcaagcag
atcggcaaggtcgcgctgctcaatgccgtccaggaggttgagctcgccgaacgcatcgag
gccgggctctatgccgagcacaagcttaagcaagatccatcgctcaagaagagcatcgag
ggccgcgacctcgaacttatcgttgctgacggcaaggccgcgaaggaccacctgctcgag
gcaaacctccgactcgtcgtgtcgctggcaaagcggtatacgggccgcggcatgctcttc
cttgacctcattcaggagggcaacctcggtctcattcgcgccgtagagaagttcgattac
gcgaagggctacaagttctcgacctacgcgacctggtggattcgtcaggcgatcacacgt
gcgatggcagaccaggcccgcacgatccgcatcccggttcacatggtcgaggtcatcaat
aaactcgcacgcgttcagcgccagatgctccaggatctcggccgcgagccgcttccagaa
gaactcgcgaaggaactcgatatgacccccgaaaaggtcgtcgaggtccagaaatacggc
cgcgagcccatctcgctgcacaccccgcttggcgaggatggcgacagcgagttcggtgac
ctcatcgaagactccgaagccgttgtgcccgcagatgccgtgagcttcacgcttttgcag
gaacagcttcactccgtactcgatacgctcagcgagcgcgaatccggtgtggtcgcgatg
cgtttcggcctcgaggacggccagcccaagaccctcgatgaaatcggcaaggtctacgga
gtgacgcgcgagcgtatccgccagatcgagtcgaagaccatgagcaagctccggcacccg
tcgcgctcgcaggtccttcgcgattacctcgattaa
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