KEGG   Dermabacter hominis: CYJ49_000100
Entry
CYJ49_000100      CDS       T09110                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
dhm  Dermabacter hominis
Pathway
dhm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:dhm00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CYJ49_000100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dhm03021]
    CYJ49_000100
Transcription machinery [BR:dhm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CYJ49_000100
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: WIK60815
LinkDB
Position
22945..24480
AA seq 511 aa
MSTSTSKKEEVTKNIEALASALDGATSVSYEALKASAKSLGISPYKVASLSNKLEETGIE
ILDRPSDSRKKKAASKSAGASKGDAADSVEASKSAPKRGKKAASKKDTSKKTASSAKSEP
EAETAEQDAPREKDGSEETESKASRKRAAKRTSAKKAGKRGTKKEDSAAEGSSGADDTDS
ADDDDPSKGFALTNDDDDSPAQQVVTAGATADPVKDYLKQIGKVALLNAVQEVELAERIE
AGLYAEHKLKQDPSLKKSIEGRDLELIVADGKAAKDHLLEANLRLVVSLAKRYTGRGMLF
LDLIQEGNLGLIRAVEKFDYAKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVIN
KLARVQRQMLQDLGREPLPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGD
LIEDSEAVVPADAVSFTLLQEQLHSVLDTLSERESGVVAMRFGLEDGQPKTLDEIGKVYG
VTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq 1536 nt   +upstreamnt  +downstreamnt
gtgtcgacgagcacgtctaagaaagaagaagtcacgaagaacatcgaggccctcgcgtcg
gctctcgatggagcgacttcggtgagctacgaggccctcaaggcctccgccaagtccctc
ggtatctccccgtacaaggttgcatcgctctccaacaagctcgaggagaccgggatcgag
atcctcgaccgtccgagcgactcccgcaagaagaaggcagcctcgaagagcgccggcgcg
agtaagggcgatgccgctgattccgtcgaggcctcgaagagtgccccgaagcgcggcaag
aaagctgcgtcgaaaaaggacacctcgaaaaagaccgcttcgagtgcgaagagcgagccc
gaagcggagacggccgagcaagacgctcctcgtgaaaaggacggctccgaagaaacagaa
tcgaaggcctcgcgcaagagggctgccaagcgtacgtcggcgaagaaggccggcaaacgc
ggcaccaagaaagaagattctgctgcggaaggctccagcggcgcagacgacaccgactcc
gccgacgacgacgatccgagcaagggcttcgcgctcacgaacgacgatgatgattcgccg
gctcagcaggttgtgaccgccggcgccactgccgacccggtgaaggactacctcaagcag
atcggcaaggtcgcgctgctcaatgccgtccaggaggttgagctcgccgaacgcatcgag
gccgggctctatgccgagcacaagcttaagcaagatccatcgctcaagaagagcatcgag
ggccgcgacctcgaacttatcgttgctgacggcaaggccgcgaaggaccacctgctcgag
gcaaacctccgactcgtcgtgtcgctggcaaagcggtatacgggccgcggcatgctcttc
cttgacctcattcaggagggcaacctcggtctcattcgcgccgtagagaagttcgattac
gcgaagggctacaagttctcgacctacgcgacctggtggattcgtcaggcgatcacacgt
gcgatggcagaccaggcccgcacgatccgcatcccggttcacatggtcgaggtcatcaat
aaactcgcacgcgttcagcgccagatgctccaggatctcggccgcgagccgcttccagaa
gaactcgcgaaggaactcgatatgacccccgaaaaggtcgtcgaggtccagaaatacggc
cgcgagcccatctcgctgcacaccccgcttggcgaggatggcgacagcgagttcggtgac
ctcatcgaagactccgaagccgttgtgcccgcagatgccgtgagcttcacgcttttgcag
gaacagcttcactccgtactcgatacgctcagcgagcgcgaatccggtgtggtcgcgatg
cgtttcggcctcgaggacggccagcccaagaccctcgatgaaatcggcaaggtctacgga
gtgacgcgcgagcgtatccgccagatcgagtcgaagaccatgagcaagctccggcacccg
tcgcgctcgcaggtccttcgcgattacctcgattaa

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