Dermabacter hominis: CYJ49_000120
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Entry
CYJ49_000120 CDS
T09110
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
dhm
Dermabacter hominis
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhm03032
]
CYJ49_000120
03400 DNA repair and recombination proteins [BR:
dhm03400
]
CYJ49_000120
Enzymes [BR:
dhm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CYJ49_000120
DNA replication proteins [BR:
dhm03032
]
Prokaryotic type
DNA Topoisomerases
CYJ49_000120
DNA repair and recombination proteins [BR:
dhm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYJ49_000120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
WIK60819
LinkDB
All DBs
Position
complement(27909..30371)
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AA seq
820 aa
AA seq
DB search
MASRTSTPAPEPIKENIVDIDVTSEMETSFLEYAYSVIYSRALPDARDGLKPVQRRILYT
MDNMGLRPDKGHVKSQRVVGDVMGKLHPHGDSAIYDALVRLAQDFNMRLPLVDGHGNFGS
LDNGPAAARYTEARMAKAALLMTASLDEDVVTMVPNYDNQLLQPEVLPAQYPNLLVNGAA
GIAVGMATNMAPHNLVEVIAAARHLLDNPEASLEDLMRFVPGPDLPSGGRIVGLDGIRDA
YETGRGTFKMRATTKVENVTSRKKAIVVTELPYQIGPEKIAEKLRDAVQAKKVQGISDYQ
DLSDRKNGMRLVLTLKSGFNPEAVLQQLYKHTPMEDSFGINNVALVNGQPRTLGLKPLLR
VFLDHRIDVVRRRTEFRLGKRRDRLHLVEGLLIAIVDIDEVIQIIRSSDTVESARERLMA
VFDLSSAQAEYILELRLRRLTKFSRLELESERDELEREIAELLEILSEEAALHRVVSAEL
QAVAEEHGTPRRTILLEADAAKAKATPASLEIEDAPCDVLLSGTGLVARVPRIDAVNADA
HTRSQHDVIRARVSTTTRSVIGAVTDLGRLLHVDVVDLPALAPSAGSSSIAGGTRLTDLL
SLEKGETVVGLVRLDLPEGETDKGGIALGTANGVVKRVNRDFPKSDGFDILTLKGDDRVV
GVVDMRDDADMDLAFITAHAHLLHFPASGVRPQGRSGSGVAGIKLGEGDAVIGFGAFDVT
KPGEVVTVAGSSSALDGVQSGSLKVSAASEYPAKGRATGGVRCHRFLRGEDVLISAWIVN
SPALACSDAGAPIDLPSPIARRDGSGSPLTLPIASVGSLS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacgtacctctacgcccgccccggagccgatcaaggaaaacatcgtcgacatc
gacgtcacgagcgagatggagacgtccttccttgagtacgcgtattcggtgatctactcc
cgcgcgctccccgacgcccgcgatggcctcaagcctgttcagcgcaggattctctacacg
atggacaacatgggccttcgccccgataaggggcacgtgaagagccagcgtgtggtcggc
gatgtgatgggtaagctccacccgcacggtgactccgcgatctacgacgcactcgtgagg
ctcgcgcaagacttcaacatgcgcctgcccctcgtggatggccacggcaactttggctcg
ctcgacaacggccccgcggccgcccgctacaccgaggcgcgcatggctaaggccgcgctc
ctgatgacggcctcgctcgacgaggacgtcgtcaccatggtgccgaactacgacaatcag
cttctccagccggaagtcctgcccgcccaatacccgaacctcctcgtcaacggcgccgcg
ggtatcgcggtgggcatggccaccaacatggcgccccacaacctcgtcgaggtcatcgcg
gctgcgcgtcacctcctcgacaatccagaggcctcgctcgaggaccttatgcgcttcgtt
cccggccccgatcttccaagcggtggccgcatcgtagggctcgacggtatccgtgacgcc
tacgagaccggccgcggaactttcaagatgcgcgcgaccaccaaagtcgagaatgtcacg
agccgcaagaaggcgatcgtcgtgaccgaactgccctaccagatcggcccggagaaaatc
gccgaaaagctccgcgatgcagtgcaggccaagaaggtccagggcattagcgactaccag
gacctctccgaccgcaagaacggaatgcggctcgtgctcaccctcaagagcggcttcaat
cccgaggcagtcctccagcagctgtacaagcacacccccatggaggattccttcggcatt
aacaatgtcgcgctcgtgaacgggcaaccccgcacgctcggcctcaaaccgctcttgcgc
gtcttcctcgatcaccgcatcgacgtcgtgcgtcgccgcactgagttccgtctcggcaag
cggcgcgatcgtctccacctcgttgagggcctcctcatcgcaatcgtcgacatcgacgag
gtcattcagatcattcgctcctcggacacggtcgagagtgcgcgcgagcgcctcatggcc
gtcttcgacctttcgagtgcacaggccgaatacattctcgaactgcgtcttcgccgactc
acaaagttctcgcggctcgagctcgagtcagagcgcgacgaactcgaacgcgagatcgca
gagctgctggaaattctctccgaggaggctgcgctccaccgcgttgtgagcgcagagctt
caggccgtcgccgaagagcatggaacgccgcgccgaacgatcctcctcgaggccgatgcc
gcgaaggccaaagccacgcccgctagcctcgagatcgaagacgcgccgtgcgatgtcctc
ctgtccggaaccggactcgttgccagggtcccgcgcatcgacgccgtaaatgccgatgcg
cacacgcgctcgcaacacgatgtcatccgtgcacgcgtgagcacaacgacacgctccgtg
attggcgccgtcaccgacctcggtcgtctcctccacgtcgatgtcgtcgaccttcctgcg
ctcgcaccttcggctggatcctcgtcgatcgcgggcggaacacgcttgaccgacctcctc
tcgctcgagaaaggtgaaacggtcgtgggcctcgtgcggctcgaccttcccgaaggtgaa
accgacaaaggcggcatcgcgctcggtaccgcgaacggcgtcgtcaagcgcgtcaacaga
gacttcccgaagtcggacggtttcgacatcttgacgctcaagggtgacgaccgtgtcgtg
ggcgtcgtcgacatgcgcgacgatgccgacatggatctggcctttatcaccgcccacgct
cacctcctccacttccccgcctcgggcgtgcgtccccagggacgcagcggctcgggcgtc
gccggtatcaagctcggcgagggcgacgcggtcatcggattcggcgccttcgatgtcacg
aaacccggcgaagtcgtgaccgtcgcgggctcctcgagcgcactcgacggagtccaatca
ggctcgctcaaggtttccgccgcctcggaatacccggcgaagggacgagcgacaggtggc
gttcgctgccatcgcttcctgcgcggcgaagacgtgctgatctccgcatggatcgtcaat
tcgcccgcactcgcatgttcggatgccggcgctcccatcgaccttccttcgccgatcgcc
aggcgagacggatccggctcgcccctcacgctcccgatcgcctcggtaggctccctgtca
tga
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