Dermabacter hominis: CYJ49_000700
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Entry
CYJ49_000700 CDS
T09110
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
dhm
Dermabacter hominis
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhm03019
]
CYJ49_000700
Enzymes [BR:
dhm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CYJ49_000700
Messenger RNA biogenesis [BR:
dhm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CYJ49_000700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
SH3_HelY
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
MTR4-like_stalk
nSTAND_NTPase5
nSTAND3
IstB_IS21
AAA_30
AAA_25
Motif
Other DBs
NCBI-ProteinID:
WIK60927
LinkDB
All DBs
Position
complement(156925..159762)
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AA seq
945 aa
AA seq
DB search
MNDAPDTGLRGHFTERFAFDLDPFQLSAMDALDRGSSVLVAAPTGAGKTIVGEYAVHRAM
AHGVKVFYTTPIKALSNQKYQELVEWLGHESVGLVTGDVNVNSEAQVVVMTTEILRNMMY
ADSPTLHSLGYVVMDEVHYLADRMRGPVWEEIIIHLPRSVQLVALSATVSNVEEFGAWIE
EVRGSTEVIVSERRPIPLWQHVLNDHELIDVFLDEDGRATPSHGSFAHRRYREVNPMLAE
IGKGTWDDVPDGHRYGGKRHGRGRKSGRSGRRGYRDRRNDQRGPHRSHRHEQRMRPRAMS
RADVVYLLEERGMLPAIFFIFSRSGCDQAVAQLMRANVRLTDDAERSQIKEAFRAALGDL
RADDYDALGIGRIERAAMNGLAAHHAGQLPAVKAVIEDLFARGLIKVVCATETLALGINM
PARTVVLDKLTKFNGTEHAKITPGEYTQLTGRAGRRGIDVEGHAVVVVGSSIAAQDVAGL
ASTRTYKLHSAFRPTYNMAVNLLDRFSLDEAYETLESSFAQFHTDRSVVAQARKAREKQE
VAEQYREAMHCSKGDIAQYADILEKISAREKELSRTRADKQRERTRSIVGKLRRGEVIAI
PGGRRSGFAVVIDHDKTVRGPRVWVITREGQLRDLYTVDFTASPMVLTTMRVPSLDRVRS
ARVRKDTASALREKLRGEDSPRAAVRARSSEKSANPNHDSLLVQLREDLREHPCHRCDDR
EQHMRWISRYRKAAREAARAERTIAQRTSQLVRQFDRVRAVLEALGYVGESDASRHVTVT
AKGELLKRIYSERDLIVCEALDQGVLEGLSPAALAAVASALSYEPRREEGGSEDHDDRSV
SRALYALSVLADDINVQERRAGLDQTPAPHPGLCSAVYRWAKGEGFAQSIGNAAVAPGDF
VRHVRQVIDLLDHLAHVPGQSHAGVAATARKARLQLLRGIVAQDM
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgctccagataccggccttcgcgggcactttaccgagcgctttgcgtttgac
ctcgatccgttccagctgagcgccatggacgcgctggaccgaggaagctccgttctcgtt
gccgctcccacgggcgctggcaaaaccatcgttggcgagtatgccgttcaccgggccatg
gcgcacggcgtcaaggtcttctatacgactccgatcaaggccctgagcaatcagaagtac
caagagcttgtggagtggcttgggcacgaatcggtcgggcttgtgacgggcgacgtgaac
gtcaattcggaagcccaggtcgtcgtgatgacgaccgagatccttcgcaacatgatgtac
gccgattcgccgactcttcattcgctcggctatgtcgtgatggatgaggtccactatctt
gcggatcgaatgcgagggccagtgtgggaagagatcattattcacttgccgcgaagcgtg
cagctcgttgccctgagcgcgaccgtttcgaacgttgaagaatttggggcgtggatagag
gaagtgcgcgggagtacggaagtgatcgtttccgagcgccgcccgatcccgctgtggcag
cacgtgctcaacgaccacgagctcatcgacgtgtttctcgacgaagacgggcgggcaacc
ccctcgcacgggtcgtttgcccatcgacgctatcgcgaggtcaatcccatgctcgccgaa
atcggcaaggggacatgggacgacgtgccagacggtcaccgctacggcggcaaacgtcac
gggcgggggcggaagagtggcaggtcgggccgccggggctatcgggatcggcgcaacgat
cagcgtggtccgcatcgttcgcatcgccacgagcagaggatgcggccacgggcgatgagc
cgagccgacgtcgtctatctcctcgaggagcgcggcatgctccccgcgatcttctttatt
ttttctcggagcggctgcgatcaggcggtggcacagctcatgcgcgcgaacgtgcggctt
acggatgacgctgagcgctcgcagatcaaagaggcctttcgcgccgcgctcggggatttg
cgtgctgacgattacgacgcgctcgggatcggcaggattgagcgggcggcgatgaacgga
ctcgcggcccaccacgcgggtcagcttcccgctgtcaaggccgtgatcgaggatcttttt
gctcgtggactcatcaaggttgtttgcgcaacggaaaccctcgccctgggcatcaacatg
ccggcgcgcaccgtcgtcctggacaagctgacgaagtttaacgggactgagcacgcgaag
atcacgccgggggagtacacgcagctcacgggacgcgcggggcgccgcggcatcgacgtc
gaagggcacgctgtcgtcgttgttggctcctcgatcgcggcacaagacgtcgccggcctc
gcctcgactcgaacgtacaaactgcactctgcctttaggcccacgtacaacatggccgtg
aacctccttgaccggtttagtcttgacgaagcgtacgagacccttgaaagcagcttcgcg
cagtttcatacggaccgaagcgtcgtggcgcaggcgcgcaaggcgcgcgagaagcaagag
gtggccgagcaataccgcgaggcgatgcactgctcgaagggcgatatcgcgcagtacgcg
gacatcctcgaaaagatctcggctcgcgaaaaagagctgagccgaacgcgtgccgataaa
cagcgcgagcgtactcgctcaatcgtcgggaagctccgtcggggtgaggtcattgccatc
ccagggggacgccgctcaggtttcgcggttgtcattgaccatgacaagacggttcgcggg
ccacgcgtgtgggtcatcacgcgtgagggccagcttcgagatctctacaccgtagatttc
accgcgagtcccatggtgctcacgaccatgcgggtgccctcgctcgatcgggtccgcagt
gcgagggtgcgaaaggacacggcatccgctctgcgggaaaagctccgaggtgaggactct
ccgcgcgcggcggtaagggcccgctcgagtgagaagagtgcgaacccgaaccatgattct
ctcctcgtgcagcttcgcgaggacctgcgagagcatccgtgccatcgctgcgacgatcgc
gaacagcacatgcggtggatctcgaggtaccggaaagccgctcgcgaggcagcgcgggcg
gagcgaacaattgcgcagcgcacgtcgcagctcgtgcggcagttcgatcgggtgcgcgcg
gttcttgaggcactcgggtacgtgggagagtccgacgccagccggcacgtcaccgtcacg
gcaaagggcgagttgctcaagcgcatctattcggagcgtgacctcatcgtgtgcgaggcc
ctcgaccagggagtgctcgaggggctctcgcccgcagcacttgcggctgtcgcgagcgcg
ctcagttacgaaccgcgccgcgaagaggggggaagcgaagaccacgacgaccgttccgtc
tcccgcgctctgtacgcgctgtccgttctggccgacgacattaacgtgcaggaaaggcga
gcgggactcgatcaaactcccgccccccatcccggtctgtgctcggcggtgtaccgctgg
gcaaagggggaggggttcgcgcagtcgatcggaaacgcggccgtcgcccctggcgatttc
gttcgtcacgtgcgtcaggtcatcgatcttctcgatcatcttgctcatgtccccgggcag
tcccacgcgggcgtcgcggcgacagcgcggaaggctcgccttcagcttttgcgcgggatc
gtggcccaggatatgtaa
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