Dermabacter hominis: CYJ49_001465
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Entry
CYJ49_001465 CDS
T09110
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
dhm
Dermabacter hominis
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dhm03016
]
CYJ49_001465
Enzymes [BR:
dhm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CYJ49_001465
Transfer RNA biogenesis [BR:
dhm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CYJ49_001465
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WIK61062
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All DBs
Position
313389..314639
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AA seq
416 aa
AA seq
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MTDSHDQLPDPECAPLIKKPAGGTPPLVTTVQGILEWCARVKADEDLAIDVERASSYRYS
AKAYLVQIKTEAAGILLLDPLACQLPGTFTDIMNSHPWILHASRQDLPSLAMLGLEPVAL
FDTEVAARLLGLPKVSLGALTEELLDVRLAKEHSSANWSKRPLPESWLDYAALDVEYLAE
LKTVLTRMLDDAHKTSWAREEFAFEATFAHPEVPDEPWRGLHGLGQLKSPLQLAVARSMW
ERRDAIARNADVAPFMVLRDKALVAMAKASSKGRQEFDNAAPKNLKHREQWWRCVREARE
LPRVHLPSKRDLGPYPNHRSWSRRYPEVLEAYKQVREGLLTRAEELHMPVENLISPGHMR
HWVWNHFSAEAEHRIPHASSEQIVQELEAVGARPWQAAQVTPAIIESLRSYSRSRG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactgattcccacgaccagttgccggatcccgagtgcgcgcccctcattaaaaaaccc
gcgggtggcacgccgcccctcgtcacgaccgttcagggcatcctcgagtggtgcgcgcgc
gtcaaagccgacgaggacctagcgatcgacgtcgagcgcgcttcgagctaccgatactcc
gctaaggcctacctcgtgcagatcaagacggaggcggcagggatattgctgcttgatccc
ctcgcgtgccaactgcctggaaccttcacggacatcatgaactcgcatccgtggattctt
cacgcctcgaggcaggaccttccctcgctcgccatgctcgggctcgaaccggtcgcactt
ttcgacaccgaggtagctgcgcgcctcctcggacttcccaaggtgagtctcggggctctt
acggaagagctgctcgatgttcggcttgccaaggagcattcgagcgccaactggtccaag
cgcccacttccggaatcgtggctcgactacgccgcgctcgacgtcgagtaccttgccgaa
ctcaaaaccgtgctcacacgcatgctcgacgacgcgcacaagacgtcttgggcacgtgag
gaatttgccttcgaagccacgttcgcccacccggaggttcccgacgagccgtggcgcggc
ctgcacggcctcggccagctcaaaagccccctgcaactcgcggtcgcgcgatcgatgtgg
gaaaggcgcgatgcaatcgcgcgtaatgcggacgtcgcgccgtttatggtgctgcgcgac
aaggcactcgtggccatggcaaaagcctcgagcaaggggcgccaggagttcgacaacgcc
gcaccgaagaacctcaagcaccgcgagcagtggtggcgatgcgtccgcgaagcgcgagaa
ctgccccgcgttcacttgccgtcgaagcgcgacctgggtccctaccccaaccatcgttcg
tggtctaggcgctaccccgaggttctcgaggcctacaaacaggtgcgcgaggggctcctc
acacgcgccgaggagcttcacatgcccgtcgagaatctcatctcccccggtcacatgcgc
cactgggtgtggaatcacttcagtgcagaggccgagcatcgcatcccacacgcgagctcc
gaacagatcgtgcaggagctcgaagcggtcggtgcgcgcccgtggcaagccgctcaagtc
acgccagcgatcatcgaatcgctgcgctcgtactcgcgctcgcgcggttaa
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