Dermabacter hominis: CYJ49_005420
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Entry
CYJ49_005420 CDS
T09110
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
dhm
Dermabacter hominis
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
dhm02048
]
CYJ49_005420
Enzymes [BR:
dhm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
CYJ49_005420
Prokaryotic defense system [BR:
dhm02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
CYJ49_005420
Subtype I-B factors
CYJ49_005420
Subtype I-C factors
CYJ49_005420
Subtype I-D factors
CYJ49_005420
Type II CRISPR-Cas system
Subtype II-B factors
CYJ49_005420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WIK59896
LinkDB
All DBs
Position
complement(1194224..1197820)
Genome browser
AA seq
1198 aa
AA seq
DB search
MTFTVITASAGSGKTYTLTTRLADALAGGVRTSEIIATTFTVKAAAELRERLQVRLLELG
HVEQANEIGSALIGTVNSIAGSIVQDYAIDMGLSPELRVLSEEESELIFTASINHTIAEI
EEREHALLARLGYEGAPDQGANSFERDESWASAVTSMTRLARTNGITPAALEHSAEESIT
AFRSMIDEAGYESGPDQRGAWLRTFERCLAELTADRDAARAAEAQGEELTHWPSDGEPAK
RVSSTLGNIEGSIVTLESLYRRMSRGIENVPWTQWMALADVTKVRPAHGGKKPGARPQAV
FAPLADLILGASDGVGVLGNEAFLADVEKLIRLAFSTAAHALEAYAEHKAALGVMDFADQ
ETLALDLVTNNERVRSSLKSRFRFLAVDEFQDTSPTQLELFMRLGDLVEDVVWVGDQKQS
IYGFRDAAPELMSGVVDAVREGRGGFAGGNVEALTDSYRSSEPPLALTNALFTAIFRDMK
PSTVALDVPGARENTRHEGSVELWKGPENLPRAKDAALRSSIATGIHALLTSGATIAGEP
LTPGDIAVLARGGGALATVTDALETLGIPTTGAKRDLWTGREAHMMRAGLASLLDPNDTL
ALAELVSLVPEHASHESWFHELGALPNRAERARRMHTWREDPALAGLKALRARAAQLSPS
EVVLALIDALELPRRVKQWSASEERLAVLDALHSLAREYEEECTGRGRAMGFAGLGAFLA
EHGKEHRLAHDPNAVTVSTIHGAKGLQWPVVVTIVPEKAKNVRDAVTVRPRPASEFDPEH
PLTGRALRFNPIINDSFAPMAKALAHDSDVTRARLANRAEEARIHYVALTRAKYQLVLAG
HKDLTETLYAQFSPEVLEAEIAEAATWTPERDESTKGVKERKEARDQKVAYTLELTEKSD
GCATLTVTGARVPTGLPGQSEPHCAADADDDAQTNECECGPRVSTISVTVLHHETPGDAD
DPNLPLEPYRRERSPLAAEPTAAPTGAPSSFIEHEGGLPARFAASAVDSTGIDVRVTIHA
KLGAPLVGEGGTHRELVGEAVHAYLATPYSQLPRERQLTLARRITERWLGTNPLLKAKVT
PEVIVEAGERWHAWITREFPGHTAGTEVPVAWWNADGQAMEGWIDSLLTLENGHSIVVDH
KTNSRTEPADVLDFIRREYVGQLATYLNALEERTGRRPDYALVHLPLSGYVVKVEVKP
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaccgtcatcaccgcgtcggcgggatccggcaaaacctacaccctcaccacg
cgactggctgatgcgctcgcgggcggcgtgcgcacgagcgaaatcatcgcgacgaccttc
acggtgaaggccgcggccgagctccgcgagcgcctccaagtacgccttctcgagctcggg
cacgtggagcaggcgaacgagatcggatcggcactcattggcacggtcaactcgatcgcg
gggagcatcgttcaggactacgcgatcgacatggggcttagccccgagctgcgagtgctg
agcgaagaggaaagcgaactcatttttacggcgtcgatcaaccacaccatcgccgagatc
gaagagcgcgagcatgcgctcctcgctcgactcgggtacgaaggggcaccagaccaaggc
gcgaactcgtttgagcgcgatgaatcgtgggcgagcgccgttacgagcatgacgaggctc
gctcgcacaaacggcatcacacccgccgccctcgagcacagcgccgaggaatcgatcacc
gctttccgctcgatgatcgatgaggcaggctacgagagtggacccgatcagcgcggagcc
tggctgcgcaccttcgaacgttgcctcgcagaactcacggcggatcgcgacgcggcgcgt
gcggccgaagcccagggtgaggaacttacgcattggccgagcgacggcgagcccgcgaaa
cgggtctcgtcgacactcggaaacatcgagggatcgatcgtcacgctcgagtcgctctac
cgtcgcatgagccgcggtatcgagaacgtgccgtggacgcagtggatggcactcgccgac
gtgacgaaagtgcgcccggcccacggaggcaaaaagcccggtgcgcgacctcaggcagtc
ttcgcaccgcttgccgacctcatccttggcgcgagcgacggcgtgggggttctcggcaac
gaagcgttcctcgcggatgtcgagaaactgattcgcctcgcgttctcgactgcggcgcac
gcactcgaagcgtatgccgagcacaaggcagcactgggggtcatggacttcgccgatcaa
gagaccctcgcgctcgatctcgtcacgaacaacgagcgcgtgcgctcctcgctcaagagc
cgcttccgattcctcgccgttgacgaatttcaggacacatccccgactcagctcgagctt
ttcatgcgccttggcgacctcgtcgaagacgtcgtgtgggtgggggatcaaaagcagtcg
atctacggctttcgcgacgcggcccccgagctcatgtcgggcgtcgtcgacgccgtgcgc
gagggccgaggagggttcgccggcggaaacgtcgaggcgcttaccgattcctatcgaagc
tctgagccgccgctcgccctcaccaatgctctgttcacggcaatctttcgagacatgaag
ccgtcgactgtcgcgcttgacgtgcccggtgcccgcgagaacacgcggcacgagggcagc
gtggagctgtggaaaggccccgagaacctgccacgcgcgaaggacgcagcattgcgaagc
tcgatcgcgacgggtatccacgcgctccttacctcgggtgccacaatcgccggagagccc
ctgacgcccggtgatattgccgtgctcgcgagaggcgggggagcgcttgccaccgtgacg
gacgcgcttgaaaccctcggcatacctacgactggcgcgaagcgtgatctatggaccggg
cgcgaggcgcacatgatgcgtgccggcctcgcgtccctcctcgacccgaacgacacgctc
gcactcgccgagctggtgagcctcgtgccggagcacgcgtcgcacgaaagctggttccac
gagcttggcgcactccccaatcgtgccgagcgtgcgcggcgcatgcacacctggcgtgaa
gatcccgcacttgcgggtctcaaagctttgcgtgcgcgcgccgctcaactcagtccgagc
gaagtcgtccttgccctcatcgatgcgctcgagcttccccggcgcgtcaagcagtggagt
gcgagcgaggagcgactcgcagttctcgatgcccttcactcacttgcccgcgaatacgag
gaggagtgcacgggcaggggccgcgccatgggctttgccggcctcggggccttccttgcg
gagcacggcaaggagcacaggcttgcgcacgacccgaacgccgtcaccgtcagcaccatc
cacggtgcaaagggcctgcagtggcccgtggtcgtcacgatcgttcccgagaaagcgaaa
aatgttcgagacgcggtcacggtgcggccgaggccagcgtcggaattcgatcccgaacac
ccccttaccggtcgagcgctgcgcttcaacccgatcatcaacgactctttcgcgcccatg
gcaaaggcgctcgcacacgatagcgatgtgacgcgcgcgcgtctcgccaaccgcgcggag
gaggcccgcatccactacgttgcgctcacgcgagcgaaatatcagctcgttcttgcaggt
cacaaagaccttaccgagacgctgtacgcgcagttttcccccgaggttctcgaggcggaa
atcgccgaagcagccacgtggacgcccgagcgggacgaatccacgaagggcgtgaaagaa
cgcaaggaggctcgggatcagaaagtcgcgtatacgctcgagctcacggagaaatccgac
ggctgcgcaaccctcaccgtgaccggggcgcgcgtcccgaccggcctgccgggccagagc
gagcctcactgcgccgccgatgctgacgacgacgcccagacgaacgagtgtgagtgcggt
cctcgcgtctcaacgatctccgtgacggttctccaccacgagactccaggcgacgccgat
gaccccaatttgcctctcgagccgtaccgcagggagcgaagcccactcgcggcggaaccc
acggcggctcccacgggggcgccgtccagtttcatcgagcacgagggcggccttcccgcg
cgttttgccgcgagcgccgttgattccaccggcatcgatgtgcgagtcacgattcacgcg
aagctcggtgcccctctcgtcggggagggcggcacgcatcgagaactcgtaggcgaagcc
gtccacgcctaccttgcgaccccgtactcgcagctaccgcgcgagcgccagctcaccctt
gcccggaggatcaccgagcgatggctcggcacaaatcctctgctcaaagcgaaggttacg
cccgaggtcatcgtcgaggccggcgagcgatggcacgcctggatcacgcgcgagttcccg
gggcacaccgccggcaccgaagttccggtggcgtggtggaatgccgacggtcaagccatg
gaaggctggatcgactcgctgctcaccctcgagaacggtcacagcatcgtcgtggatcac
aaaacgaactcgcggaccgaacctgccgacgtcctcgatttcattcgccgcgaatacgtg
ggccagctcgcgacctacctgaatgccctcgaggaacgcacggggcgccgccccgattac
gccctcgtgcatctcccactcagcgggtacgtcgtgaaagtggaggtcaagccctag
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