Dermabacter hominis: CYJ49_007275
Help
Entry
CYJ49_007275 CDS
T09110
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
dhm
Dermabacter hominis
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhm03032
]
CYJ49_007275 (topA)
03400 DNA repair and recombination proteins [BR:
dhm03400
]
CYJ49_007275 (topA)
Enzymes [BR:
dhm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CYJ49_007275 (topA)
DNA replication proteins [BR:
dhm03032
]
Prokaryotic type
DNA Topoisomerases
CYJ49_007275 (topA)
DNA repair and recombination proteins [BR:
dhm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CYJ49_007275 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WIK60241
LinkDB
All DBs
Position
complement(1646074..1648770)
Genome browser
AA seq
898 aa
AA seq
DB search
MSARNLVIVESPAKAKTIGKYLGDDFTVAASVGHIRDLPLPKELSADMKKGPYGRFAVNV
EEGFEPYYVVNPDKKKTVSELKKLLKEADALYLATDEDREGEAIAWHLLEALKPKKSLPV
YRMVFHEITKEAIQKALTETRELDMPLVDAQETRRILDRLVGYELSPVLWRKVRRGTSAG
RVQSVATRLVVDRERERMAFKAASYWDVTGEFITSELEDRSVDTPAFTAQLRTLDGQRVA
TGRDFTDAGELKKSLRANVTVLTEESARLLIEALDGAKATVGNLESKPYTRRPAAPFTTS
SLQQEASRKLRMGARHTMSTAQRLYENGYITYMRTDSVVLSGEAIRASRAQIQEMYGAEY
VPDRPRVYTNKSQGAQEAHEAIRPAGSNFRTPAQVSRQLSGDEFRLYELIWKRTVASQMA
DAKGTTTSVTLDVEGKGRTAQFGASGTIITFRGFLAAYEEGRDQSRYAEHDDKDKRLPQM
KEGQQLTAAQYTPNGHETTPPPRYTEASLVRALEERGIGRPSTYAATISVIQDRGYVEKK
GSALVPSWLAFSVVKLLEEHFGTLVDYEFTADMEAGLDRIAAGNTDRVHWLSDFYYGKSG
SFDTPAEGGLKATLDNLGDIDARAINTVPIGNGIDLRMGQYGPYIERAVEGSDTPQRANV
PADLAPDELTLEKAEELMARAKDDGRVLGRDPDSGFEILAKDGRYGPYVTENLELDEATK
ALPKTKQPKPRTASLFKDMDLATVTLEDALKLLSLPRVVGKDAEGVEITAQNGRYGPYLK
KGTDSRSLETEAQLFTITEEEALALYAQPKRRGRAAAKPPIAELGVDPTSEKPIVIKDGR
FGMYITDGTTNVTLRKDESPETMTHERAVERLAEKRAKGPAKRKTTRKSSSRAKSTKK
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgctcgcaacctcgtgatcgtcgagtcccccgcgaaggcaaagaccatcgggaaa
tacctcggggacgacttcacggtcgccgcgtcagtgggacacattcgtgaccttcccctg
cccaaagagctgtccgccgacatgaagaagggcccctacggccgcttcgccgtcaacgtc
gaagaaggcttcgagccctactacgtcgtcaatcccgacaagaaaaagactgtctccgaa
ctcaagaagctcctcaaagaggccgatgctctctacctcgcaaccgatgaggaccgcgag
ggtgaagcgattgcctggcacctcctcgaggcactgaagcccaagaagtcgcttcccgtt
taccggatggtgttccacgagatcacgaaggaagccatccaaaaggcgctcaccgagacg
cgcgagctcgacatgccgctcgtcgatgcccaggaaacccgccgtattctcgaccgactc
gtcggctacgagctctcccccgtgctgtggcgcaaggttcgccgcggcacgagcgcaggc
cgcgtccagtcggtggcgacacgcctcgtcgtcgaccgcgagcgcgagcgcatggcgttc
aaggccgcttcgtactgggatgtgacgggcgagttcatcacctctgagctggaggatcga
agcgtcgacacccccgccttcaccgctcagctacgaaccctcgacggccagcgggtcgct
acggggcgtgacttcaccgacgcgggtgagctcaaaaagagcctccgggcaaacgtcacg
gttctcaccgaggagagtgcacgactgctcatcgaggcgctcgacggcgcgaaggccacc
gtcggaaacctcgagtccaagccctacacgcggcggcccgccgctcccttcacgacgagc
tccctccagcaggaggcgagccgaaaactgcgcatgggtgcccgccacacgatgtcgacc
gcgcagcggctctacgaaaacggctacatcacctacatgcgtaccgactccgtggtgctg
tccggtgaggcgattcgcgcgagccgcgcacagatccaggaaatgtacggtgcggagtac
gttccggatcgccctcgcgtgtacacgaacaagtcgcagggtgcgcaggaagcccacgag
gcaattcgcccggcgggttcgaacttccgcacacccgcgcaggtatctcgccagctcagt
ggcgacgagttccgcctgtacgaactgatctggaagcgcaccgtggcgtctcaaatggcc
gacgccaagggaacgaccacgtcggtcacgctcgatgttgaaggcaaggggcgcaccgcc
cagttcggcgcctcgggcacgatcattacgttccgcggtttcctcgcggcctacgaggaa
ggccgcgaccagtcgcggtatgcggaacacgatgacaaggacaagcgcctgccccaaatg
aaggaggggcagcagctcacggccgctcagtacacgccgaacggtcacgaaacaacgcca
ccgccgcgctacacagaggcgtcactcgtgcgcgcactcgaggagcgcgggatcggccgc
ccctcgacctacgcggcgacgatctccgtgatccaggatcgcggctacgtcgaaaagaag
ggctcggccctcgtgccgagctggctcgcgttcagcgtcgtgaagcttctcgaggagcac
ttcgggacgctcgtcgattacgagttcacggccgatatggaagcggggctcgaccgaatc
gccgcgggtaacacggaccgcgtgcactggctgagcgacttctactacggcaagtccggt
tcgttcgacacccccgccgagggcggtctcaaggcgaccctcgacaatctcggcgatatc
gacgcgcgcgcgatcaacaccgtcccgatcggcaacggcatcgaccttcgcatgggccag
tatggcccctacatcgaaagggcggtcgagggttcggatacgcctcagcgagcgaatgtt
cccgccgatctcgcaccggatgagctcacgctcgagaaggccgaagagctcatggcacgc
gcgaaggacgacggtcgcgtgcttggccgcgaccccgattcgggctttgagatcctcgcg
aaggacggtcgctacggcccctacgtcacggaaaacctcgagcttgatgaggccactaag
gcgctcccgaaaacgaaacagccgaaaccccgcacggcttcgctgttcaaggacatggac
cttgcgaccgtgaccctcgaggacgccctcaagctcctctcgctcccccgcgttgtcggc
aaggacgcggagggcgtcgagatcaccgcgcagaatggccgctacggcccgtatctcaaa
aagggcacggattcgcgctcgctcgaaaccgaagcacagctgttcaccatcaccgaggaa
gaggccctcgcactctacgcccagcccaagcggcgcgggcgcgcggcggcaaaacccccg
atcgcggaacttggcgtggatcctacgagcgagaaaccgatcgtgatcaaagacggtcgt
ttcggcatgtacatcaccgacggcacgacgaacgtcacgcttcgcaaagatgagtcgccc
gaaacgatgacccacgagcgcgccgtcgagcgtctcgcggaaaaacgcgcgaagggcccc
gcaaagcgcaagacaacgcgaaagtccagctcgcgagcgaagtccacgaaaaagtag
DBGET
integrated database retrieval system
