Dermabacter hominis: CYJ49_008225
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Entry
CYJ49_008225 CDS
T09110
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
dhm
Dermabacter hominis
Pathway
dhm02024
Quorum sensing
dhm03060
Protein export
dhm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CYJ49_008225 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CYJ49_008225 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CYJ49_008225 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
dhm02044
]
CYJ49_008225 (ffh)
Enzymes [BR:
dhm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CYJ49_008225 (ffh)
Secretion system [BR:
dhm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CYJ49_008225 (ffh)
Eukaryotic Sec-SRP protein
CYJ49_008225 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
nSTAND3
Zeta_toxin
APS_kinase
AAA_22
AAA_31
MMR_HSR1
AAA_18
AAA_16
AAA_30
AAA_24
NTPase_1
6PF2K
KTI12
NPHP3_N
KAP_NTPase
ArsA_ATPase
Thymidylate_kin
AAA_33
TsaE
hnRNP_Q_AcD
SLFN-g3_helicase
MobB
ABC_tran
AAA_17
NACHT
AAA_2
DUF285
ATP_bind_1
AAA
BESS
Motif
Other DBs
NCBI-ProteinID:
WIK60418
LinkDB
All DBs
Position
1860543..1862135
Genome browser
AA seq
530 aa
AA seq
DB search
MFDNLSDRISKTLKGLRGQGRLTEADIDKTVREIRRALLDADVAVPVVRQFAARVRERAL
GAEVSKALNPAQQVVKIVHAELVDILGGATGGLQFAKNPPTVIMLAGLQGAGKTTLAGKL
AKYLKDEGHTPLLVASDLQRPNAVNQLQIVGERAGVKVFAPEPGNGVGDPVVVALDGVAT
AAHEQYDVVIVDTAGRLGIDEEMMQQARDIRDAVNPDNTLFVVDAMIGQDAARVAEAFRD
GVGFTGVVLSKLDGDARGGAALSITGITDRPILFASTGEALGDFERFHPDRMASRILDMG
DVLTLIEQAEKRMDREEAEKVASKLAQGEEFNLNDFMSMLQQIKSMGSMKKMLGMMPNMR
QYKQAIDQFDDSMITRIEAMVQSMTPFERANPKEINGTRRARIAKGSGTTVTEVNRLLDQ
FKQMQKMMGSVGKGLAGGGGFGAPGMGFGKKSRGRMQSPKKNKKKSRSGNPAKRAAEEKA
WAEQQAQKKGSAFGGAGAFGGVGNSADASADLSNLDMNQLPPELRKMLGK
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgacaatctttccgatcgcattagtaagaccctcaagggcctgcgtggccagggc
cgcctcactgaggccgatatcgacaagaccgtgcgtgagatccgccgcgcactgcttgac
gcggacgtcgcggtccccgtcgttcggcagtttgccgcgcgcgtgcgcgagcgtgcccta
ggtgccgaggtgtcgaaggccctcaaccccgcgcagcaggtcgtcaagatcgtgcacgcc
gaactcgtggacattctcggcggtgcgaccggcgggctccagttcgcgaaaaacccgccg
accgtcatcatgctcgcgggcctccagggcgccggtaaaacgacacttgccggcaagctt
gccaagtacctcaaggacgagggccacacgccgctgctcgttgcgtccgacctccagcgc
cccaatgccgtcaaccagctccagatcgtcggtgagcgggcgggcgtcaaggtgttcgcc
cccgagcccggcaatggcgtgggggaccctgttgtcgttgccctcgacggtgtcgcgacg
gcggcgcacgagcagtacgacgttgtgatcgttgataccgcgggccgcctcggcatcgac
gaagaaatgatgcagcaggcgcgggatatccgcgatgccgtcaaccccgacaacaccctt
tttgtcgtcgacgcgatgatcggccaggatgccgcgcgcgttgccgaagcgttccgcgac
ggcgtgggcttcacgggcgtggtgctgtcgaaactcgacggcgatgcacgcggtggcgcg
gccctctccatcacgggcatcaccgaccgcccgatcctcttcgcctcgaccggtgaggca
ctcggtgatttcgagcggttccacccggaccgcatggcgagccgcatcctcgatatgggt
gacgtgcttaccctcatcgagcaggccgaaaagcgcatggatcgcgaggaagccgagaag
gtcgcctcgaagctcgcgcagggcgaagaattcaacctcaacgacttcatgtcgatgctc
cagcagatcaagtcgatgggctcgatgaagaagatgctcggcatgatgccgaacatgcgc
cagtacaagcaggcgatcgatcagttcgacgattcgatgatcacgcgtatcgaagcaatg
gtgcagtccatgacgccgttcgagcgcgcgaaccccaaagagatcaacggcacacgccga
gcacgcatcgcgaagggctccggcacgaccgtgaccgaagtgaatcgtctgctcgatcag
ttcaagcagatgcaaaagatgatgggctcggtgggcaagggcctggccggcggcggcggt
ttcggggcgccgggcatgggatttggcaagaaatcccgcggacgcatgcagtccccgaag
aaaaacaaaaagaagtcccgttcgggcaaccctgcgaagcgcgcagccgaagaaaaggcg
tgggcggagcagcaggcccagaagaagggttcggccttcggcggcgcgggcgcgtttgga
ggggtggggaattccgccgacgccagcgccgacctgtcgaacctcgacatgaatcagctt
cccccagaacttcgcaagatgctcggaaagtag
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