Dermabacter hominis: CYJ49_008435
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Entry
CYJ49_008435 CDS
T09110
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dhm
Dermabacter hominis
Pathway
dhm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CYJ49_008435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhm03019
]
CYJ49_008435
03016 Transfer RNA biogenesis [BR:
dhm03016
]
CYJ49_008435
Enzymes [BR:
dhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CYJ49_008435
Messenger RNA biogenesis [BR:
dhm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CYJ49_008435
Transfer RNA biogenesis [BR:
dhm03016
]
Prokaryotic type
tRNA degradation factors
CYJ49_008435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_2
KH_KhpA-B
DUF5006
RNA_helicase_helical
Motif
Other DBs
NCBI-ProteinID:
WIK61813
LinkDB
All DBs
Position
1900539..1902776
Genome browser
AA seq
745 aa
AA seq
DB search
MEGHNIHSTIATIDNGSYGKREVRFETGRLAKQAAGAVAVYLDDDTMVFSATAVSNQPKE
QFDFFPLTVDVEERMYAAGRIPGSFFRREGRPGTDAILAARLTDRPLRPAFVKGLRNEVQ
VVLTVMAVNPDDAYDVVGINGASASTQISGLPFSGPIGGVRIALMPNAEGGQWIAFPTFS
QLDEAVFSMVVAGRIVEDDVAIMMVEAEATDNAWSLIKEQGAVAPTEEVVAQGLEAAKVY
IRTLCEAQKELAAKAAKPVREFPLFLDYQDDAYDLVAAAATARLREVMSIAGKQEREEAT
ETLLAQVKEELADKLDEREKEITGAFRALTKKVVREKILTEGVRIDGRGLRDIRQLSAEV
EVLPRVHGSAIFERGETQILGVTTLNMLKMEQQIDGLSPVDHKRYIHHYNFPPYSTGETG
RVGSPKRREIGHGMLAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLALL
NAGVPLKAPVAGIAMGLVSDTVNGETKYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQL
DTKLDGIPASVLAGALSQAREARLHILSVLEEAIDQPDEMSPNAPRVLAVTIPVDKIGAV
IGPKGQMINQIQDDTGADITIEDDGTVYIGATDGPSAEAARAAVNAIANPLVPEVGERYL
GTVVRVVDFGAFISLTPGKDGLLHVSQLRKLNGGKRVESVDDVVSVGQKLEVEIREIDSR
GKISLAVAADEDDAEKTDESEQGAE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccacaacattcattcaacgattgccacgatcgacaacggctcgtacggtaag
cgcgaagtgcgctttgaaaccggccgcctcgcaaagcaggccgcgggtgccgtcgccgtc
tacctcgacgacgacacgatggtgttcagcgcaaccgctgtctccaaccagccgaaggag
cagttcgacttcttcccgctgaccgttgacgtcgaagagcgcatgtacgctgcgggccgt
atccccggttcgttctttcgccgcgagggccgcccgggtaccgacgcgatcctcgcagcc
cgcctgaccgaccgcccgctgcgtcccgcctttgtcaagggcctgcgcaacgaagtccag
gttgtcctgacggtcatggcggtcaaccccgacgatgcctatgacgtcgttggcatcaac
ggtgcgtcggcctcgacccagatttcgggcctgccgttctcgggccccatcggtggcgtg
cgtatcgcgctcatgccgaacgccgagggcggccagtggatcgccttcccgaccttcagt
cagctcgatgaggccgttttctcgatggtcgtcgctggacgcatcgttgaagatgacgtc
gcgatcatgatggttgaggcggaagcgaccgacaacgcctggtcgcttatcaaggagcag
ggagcggtggcgccgaccgaagaggtcgtcgcccagggcctcgaagctgccaaggtttac
atccgcacgctgtgcgaggcgcagaaggagctcgccgcgaaggctgcgaagcccgttcgc
gagttcccgctcttcctcgactaccaggacgatgcgtacgatctcgtcgctgcagcggcg
accgctcgcctccgtgaggtcatgagcatcgcgggcaagcaggaacgcgaagaggccacc
gagactctgctcgcgcaggtcaaggaggaactcgccgacaagctcgacgagcgtgagaag
gaaattaccggagccttccgtgcgctcacgaagaaggtcgtgcgcgagaagatccttacg
gagggcgtgcgtattgacggccgcggccttcgcgacatccgccagctttcggccgaggtc
gaggtgctgccgcgagtgcacggttcggctatcttcgagcgcggcgagacccagattctt
ggcgtcaccaccctcaacatgctcaagatggagcagcagatcgacggcctttcgcctgtc
gatcacaagcgctacatccaccactacaacttcccgccttactcgaccggtgagacgggc
cgcgtgggctcgcccaagcgccgcgaaatcggccacggcatgctcgccgagcgcgcactc
gtgccggttctgccgagccgtgaggagttcccgtacgcgattcgacaggtatccgaggct
ctcggctcaaacggctcgacctcgatgggctccgtgtgcgcttcgaccctcgcgctcctg
aatgccggtgtgcccctcaaggcgcccgttgccggtatcgccatgggcctcgtttccgac
accgtgaacggcgagacgaagtacgcggctctcaccgacatcctcggtgcagaggacgct
ttcggcgacatggactttaaggtcgcgggaacctcagagttcgtgacggctatccagctc
gacacgaagcttgacggcatccccgcttccgttctcgcaggcgctctgtcgcaggctcgc
gaagcccgcctgcacatcctctctgttctcgaagaggccatcgatcagcccgatgagatg
agccccaacgcgccgcgcgttcttgccgtcactatcccggtggacaagatcggcgcggtc
atcggcccgaaggggcagatgatcaaccagatccaggacgacaccggtgcggacatcacg
atcgaggacgacggcaccgtgtacatcggtgcgaccgacggcccctcggctgaggctgcg
cgtgcggccgtcaacgcgattgcgaacccgctcgttcccgaggtcggcgaacggtacctc
ggcacggttgtgcgtgtcgtcgactttggcgcgttcatctcgctcaccccgggcaaggac
ggcctgctgcacgtctcgcagttgcgtaagctcaacggcggtaagcgcgtggagagcgtc
gacgacgtcgtgagcgtcggccagaagcttgaggttgagatccgcgagatcgactcgcgc
ggcaagatctcgctcgctgtggcggctgacgaagacgacgctgagaagacggacgagtcc
gagcaaggcgccgagtag
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integrated database retrieval system
