Dermabacter hominis: CYJ49_008695
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Entry
CYJ49_008695 CDS
T09110
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dhm
Dermabacter hominis
Pathway
dhm03030
DNA replication
dhm03430
Mismatch repair
dhm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYJ49_008695 (dnaE)
03430 Mismatch repair
CYJ49_008695 (dnaE)
03440 Homologous recombination
CYJ49_008695 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhm03032
]
CYJ49_008695 (dnaE)
03400 DNA repair and recombination proteins [BR:
dhm03400
]
CYJ49_008695 (dnaE)
Enzymes [BR:
dhm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYJ49_008695 (dnaE)
DNA replication proteins [BR:
dhm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CYJ49_008695 (dnaE)
DNA repair and recombination proteins [BR:
dhm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CYJ49_008695 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
DUF655
Motif
Other DBs
NCBI-ProteinID:
WIK60509
LinkDB
All DBs
Position
1955350..1958901
Genome browser
AA seq
1183 aa
AA seq
DB search
MASEDFVHLHVHTDYSMLDGASKISKLVNAVAEAGQKAIAITDHGYVFGAYEFYKNAVAA
GVKPIIGVEAYVTPGTSRHDRSRVQWGTKAQQDAGDDVSARGAYTHLTLLSRTTAGMHNL
FRLASFASLDGQMGKWPRMDREILSKYSDGLIASTGCPSGEIQTRIRLGQWDEAVKAAGE
YQDMFGKENYFVELMDHGLELERRVTKDLIELSKKIGAPLLATNDLHYVYEDDAKIQDAL
LCINSGSTFDTPGRFKFDGSGYYLKSAREMRELFRELPEACDNTLRVAEMCDVQFTTTAE
GANYMPRFPVPEGEDEHSWFVKEVQKGLHERYPSGIPDEVQERADYEVGIITRMGFPGYF
LVVSDFIRWAKERGIRVGPGRGSGAGSMVAYAMRITDLDPLPHGLLFERFLNPDRVSMPD
FDVDFDDRRRGEVLEYVTERYGDDKVAQVITYGVMKTKNSIKDSARVLGEPYALGDQMTK
ALPPAVMGKDITLKGIFDENDKRYAEAEDFRRQYRENPSWQRVMDIAQGVEGLTRGWGVH
ACAVIMSSETLTDIIPMMRRPSDGQIITQFDYPTCETLGLLKMDFLGLRNLTVISDAIEN
IESNGKEVPDLDHLGFEDPATFDLLQRGDTLGVFQLDGAGMRSLLRQMKPDKFGDISAVS
ALYRPGPMGMNSHTNYALRKNGLQEITPIHPELEEPLHGILAETYGVIVYQEQVMQTAQK
VAGFTLGQADILRRAMGKKKKAELDKQYVGFRQGMLDHGYSDSAVQALWDVLLPFADYAF
NKSHSAAYGVVSYWTAYLKANYPTEYMAALLTSTQNNRDRLGLYLGDCRHRHITVLPPDV
NSSLMNFAAVGSDIRFGLSAIQNVGAHVVEEIIKTREEKGEFTSFTDFLDKVPLSVCNKR
TIDSLIKGGAFDSLGHNRRSLVLVHEDAVDGIVDVKRKEAQGQDDLFGGGMFGDDYASGS
AATIQIPELPEWDRKQKLAFEREMLGLYVSDHPLQGLEHVIAQASSHSITALAEAEDTDS
LGMVTIAGLITSIQRKITKKGDTWAIVTVEDLEGAIDCLMFPQSYQQVATELAGDLVVSM
KGRVDNSKGSPEMRVQEMRVLDTSGAMSDGPLMITVPDSRMTSEVAQQLRGILEDNPGGS
EVRLRLTEPGRSTLMRVDRRLSVAPSPALFASLKTLLGAQCLN
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaggatttcgttcaccttcacgtccacaccgattactcgatgcttgatggg
gcctcgaagatcagcaagctcgtgaacgccgtcgctgaagccggccagaaggcaatcgcg
atcaccgaccacgggtacgtgtttggggcctacgagttttacaagaacgctgtagccgcg
ggcgtgaagcccatcatcggtgttgaggcgtacgtgacgcccggcacgagccgtcacgat
cgatcgcgcgtgcagtggggcacgaaggcgcagcaggatgccggcgatgacgtttcggcg
cgcggtgcctacacccacctcacactcctgagccgcacgaccgcgggcatgcacaacctg
ttccggctcgcgagcttcgcttcgctcgatggtcagatgggcaagtggccccgcatggac
cgcgagattctctcgaagtattccgatggtctgatcgcctcgacgggctgcccttccggt
gagatccagactcgcattcgcctcgggcagtgggacgaagccgtcaaggccgctggcgaa
taccaggacatgttcggtaaggagaactacttcgtcgagctcatggaccacggtcttgag
cttgagcggcgcgtcacaaaagacctcatcgagctgtcgaagaagattggcgcgcctctt
cttgccacgaacgacctgcattacgtgtacgaagatgacgcgaaaattcaagacgcactt
ttgtgcatcaactcgggctcgacgttcgatacgccggggcgcttcaagtttgatggttcg
ggttattacctcaagagcgcacgtgagatgcgcgaactctttcgtgagctacccgaggcg
tgcgataacactctgagggtcgccgaaatgtgcgacgtgcagttcacgacgaccgcggag
ggcgcgaactacatgccgcgcttcccggttcccgagggagaggacgagcactcctggttc
gtgaaggaagtccaaaagggtcttcacgagcggtacccgagcgggatccccgacgaagtg
caggaacgtgccgactacgaggttggcatcatcacgcgaatgggctttcccgggtacttt
cttgtcgtctccgacttcatccgctgggcgaaggaacgcggtatccgcgtgggaccgggc
cgtggttccggtgcgggctcgatggtggcgtacgcgatgcgaattaccgacctcgacccc
cttcctcacgggcttctcttcgagcgcttcctcaacccggatcgcgtgtccatgcccgac
ttcgacgtggacttcgacgatcgccgccgcggcgaggtgctcgagtatgtgaccgaacgc
tacggagacgacaaggtcgcgcaggtcatcacgtacggcgtgatgaaaacgaagaactcg
atcaaggactcggcgcgcgtgctcggcgagccgtatgcgctcggcgaccagatgacgaag
gcgcttccgcccgccgtgatgggcaaggacatcacgctcaagggcatcttcgacgagaac
gataagcgctacgcggaggctgaggatttccgccgtcagtatcgcgagaatccttcgtgg
cagcgcgtcatggatatcgcgcagggcgtcgagggcctcacgcgcggctggggtgtgcac
gcgtgcgcggtgatcatgtcgagcgagaccctcaccgacatcatcccgatgatgcgtcgc
ccttccgatgggcagatcatcacgcagttcgactatccgacgtgtgaaaccctcggcctg
ctcaagatggacttccttgggctgcgtaacctcacggtgatttccgacgcgattgagaac
atcgagtcgaacggcaaagaggtccccgacctcgaccaccttggcttcgaagatccggcg
acattcgatctgcttcaacgcggcgatactctcggcgtgttccagctcgatggtgcgggc
atgcgctccctgcttcgccagatgaaacccgataagttcggcgacattagcgccgtgtcg
gccctgtatcgtccgggcccgatgggcatgaactcgcacacgaactatgcgctcaggaag
aacgggctccaggagatcacgccgatccacccggagctcgaggaaccgcttcacggcatt
ctcgccgagacctacggcgtgatcgtgtaccaggagcaggtcatgcagaccgcgcagaaa
gtcgcgggcttcacgcttggtcaagctgacattcttcgtcgagccatgggcaagaagaag
aaggcagaactcgataagcagtacgtgggctttcgccagggcatgctcgaccacggctat
agcgattccgccgtgcaggccctgtgggatgtgctgcttccgttcgcggactacgcgttc
aacaagtcgcactcggcggcgtacggggtcgtgtcgtactggaccgcctacctcaaggcg
aactatcccaccgaatacatggcggcgcttctcacgtcgacccagaacaaccgcgaccgg
ctcggcctctacctcggcgattgccgccaccgacacatcaccgtgcttcctccggacgtg
aactcctcgctcatgaacttcgcggccgtcggttctgatatccgcttcgggctgtcggcg
attcagaatgtcggcgcgcacgtcgtcgaagagatcatcaagacgcgtgaggagaagggc
gagttcacgtcattcacggacttcctcgacaaggttccgctttcggtgtgcaacaagcgc
acgatcgattcgctcatcaagggcggcgcgtttgactcgctcggtcacaaccgccgttcg
ctcgtcctcgtgcacgaggacgcggttgacggcatcgtggacgtcaaacgaaaggaagct
caggggcaggatgaccttttcggcggcggcatgttcggcgacgactatgcgtcgggtagc
gccgcgacgattcagattccggagcttcccgagtgggatcgtaagcagaagctcgcgttt
gagcgcgagatgcttggcctctacgtgagcgatcatccccttcagggccttgagcacgtt
attgcgcaggcgagctcgcattcgatcacagctctcgcggaagccgaggatacggactcg
cttgggatggtcacgatcgcgggtctcatcacgagtattcagcgcaagatcacgaagaag
ggcgatacgtgggcgatcgtcaccgtcgaggatctcgagggtgctatcgactgtctcatg
ttcccgcagtcgtatcagcaagttgcgacggagctcgcgggtgatctcgttgtctcgatg
aaggggcgcgtcgacaactcgaagggctcacccgagatgcgcgtgcaggagatgcgggtg
cttgacacgtccggggcgatgtccgacggtcccctgatgatcaccgtccccgattcgcgc
atgacgagcgaggtcgcccaacagctccgcgggattctcgaggacaacccgggcgggagc
gaagtgcgtctgcgtcttaccgagcccggccgatcgacgcttatgcgcgtggaccgtcga
ctatcggtggcgccttcgcctgccctttttgcctccctcaagaccttgctgggcgcgcag
tgcttgaactag
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