Dialister hominis: Dia5BBH33_00440
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Entry
Dia5BBH33_00440 CDS
T06439
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dho
Dialister hominis
Pathway
dho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dia5BBH33_00440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dho03019
]
Dia5BBH33_00440
03400 DNA repair and recombination proteins [BR:
dho03400
]
Dia5BBH33_00440
Enzymes [BR:
dho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dia5BBH33_00440
Messenger RNA biogenesis [BR:
dho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dia5BBH33_00440
DNA repair and recombination proteins [BR:
dho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dia5BBH33_00440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HRDC
DEAD
Helicase_C
RQC
RecQ_Zn_bind
ResIII
HHH
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
BBK24109
UniProt:
A0A8D4UT70
LinkDB
All DBs
Position
48644..50770
Genome browser
AA seq
708 aa
AA seq
DB search
MTPGEVLKQYFGYDSFRPVQEEVISTILKKKDILAIMPTGAGKSICFQIPAMMFPHGSII
ISPLISLMKDQVEALTEQGILASYVNSTVPYDEAIERLRDMYRGRIKILYMAPEKLEPSY
FTDCLAQVPISMVVIDEAHCVSQWGHDFRPSYRKIKTFIDSLPKKPIVTAFTATATPAVE
EDMKKSLGLSHAEIFRTGLDRPNLSFRVIRDADKEALLLRYVKAHKKESGIIYCATRKAV
DEVHDLLKRAGIRAGRYHAGMEDEERRKAQEDFSYDRTPVMAATNAFGMGIDKSNVRYVI
HYHMPKSLEAYYQEAGRAGRDGASAECILLYNGRDSGIQRYLIDQGNQDEEQKKMDYHRL
NAMIDYCQTTACLRNFILTYFGEKADKPCGHCGNCESGQAKVDVTDTAALIFKTVRSLHG
RFGASTVADILAGSRAKAVLDRKLDELPTYGKLSFVKARHIKSALNSYVADGYLVREGEP
YPVLRLTNKAEDVLEGKANVFGLAFGAEDAMADAAVERKLAARSPVHGSLFDKLRSLRKE
IASAEHVPPFVVFSDATLEDMAVISPKTLEEMSTVRGVGEFKLRKYGTRFLKIFLEEADK
DEKLRETWRKNPIFKETEPEDTAEDMPEEEPSSAALFAQLKFYRNYLASKKGVPVNRIFT
DDTLSEMARKRPETKEELRAIRGIGPKKSAEYGDAFINIIKSSPQSAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgggtgaagtgctgaagcagtattttggctacgattcgttccggcctgtacag
gaggaagtcatttccacgatcctgaagaagaaggatattctggcaatcatgcctacgggc
gccgggaaatccatctgttttcagatacctgccatgatgtttcctcacgggtccatcatc
atctcgcccctgatttccctcatgaaggatcaggtggaggcgctgacggagcagggcatc
ctagcttcgtacgtgaacagcacggtgccttatgatgaagcgatcgagcgcctgcgcgac
atgtacaggggccgcatcaagatcctttacatggcaccggaaaagctggaaccgtcctac
ttcactgactgcctcgcgcaggtgccgatttccatggtcgtcatcgatgaggcgcactgc
gtctcccagtggggccatgatttccgcccgtcgtacaggaagatcaagaccttcatcgat
tcccttcccaagaaaccgatcgtcacggcgttcacagcgaccgcgacgccggctgtcgaa
gaggatatgaagaagagcctggggctttctcatgcggaaatcttccgcaccggactcgac
cggccgaacctgtccttccgcgtcatccgtgatgcggacaaggaagcgctgctcctccgg
tacgtgaaggcgcacaagaaggaaagcggcatcatttactgtgcgacgagaaaggcagtc
gatgaggtccatgaccttctgaaacgtgccggcatccgcgcaggaagataccatgcagga
atggaagacgaggaaagacgaaaggcgcaggaggatttctcctacgaccgtacgcccgtc
atggcggcgacgaatgcattcggcatgggcatcgacaagagcaatgtgcgctatgtcatc
cattaccatatgccgaagagcctcgaggcgtactaccaggaagcagggagagccggacga
gacggcgcgagcgctgagtgcatccttctttacaatggaagggactcaggcatccagcgc
tacctcatcgatcagggcaatcaggacgaagagcagaagaagatggactaccaccgcctg
aatgccatgatcgattactgccagacgacggcctgcctccgcaatttcatcctgacctac
ttcggggagaaggcggacaagccctgcggccactgcggcaactgcgaaagcgggcaggcg
aaggtggacgtgacggacacggccgccctcattttcaagaccgtccgctcgctccacggg
cgcttcggcgcatcgactgtcgcagacattctggcgggcagccgcgcgaaggcagtgctg
gacaggaagctcgacgagctcccgacgtatggcaagctgtccttcgtgaaggccaggcat
atcaagagcgcgctgaacagctacgtcgctgacggctacctcgtccgcgagggcgagccg
taccccgtgctgcgcctcacaaacaaggcagaggacgtccttgaagggaaagccaatgta
ttcggccttgccttcggcgcagaagacgccatggcggatgctgccgttgaaaggaaactg
gccgccagaagcccggtccacggcagtcttttcgacaagctcagaagcctccggaaagaa
atcgcatccgccgagcatgtgccaccctttgtcgtattttccgatgccacgctggaagac
atggctgtcatttctccaaagacacttgaagaaatgagtaccgtcaggggcgtgggcgag
ttcaagctaagaaagtacggcactcgtttcctgaagattttcctcgaagaagcagacaag
gacgaaaagctccgcgagacatggagaaagaatccgatcttcaaggaaacagaaccggaa
gacactgcagaagatatgccggaagaggagccatcctcggcagcgctctttgcgcagctt
aagttttacagaaattacctcgcgtcaaagaaaggcgtgccggtcaaccgcatctttacc
gacgacaccctctcggaaatggcaaggaagcgtcctgagacaaaggaagagctccgggcc
atccgcggcataggaccgaagaagtccgccgaatacggagacgcgttcatcaatattatc
aagtcatcaccgcagagtgcggagtaa
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