Dialister hominis: Dia5BBH33_02390
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Entry
Dia5BBH33_02390 CDS
T06439
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dho
Dialister hominis
Pathway
dho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dia5BBH33_02390 (cshA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dho03019
]
Dia5BBH33_02390 (cshA)
03009 Ribosome biogenesis [BR:
dho03009
]
Dia5BBH33_02390 (cshA)
Enzymes [BR:
dho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dia5BBH33_02390 (cshA)
Messenger RNA biogenesis [BR:
dho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dia5BBH33_02390 (cshA)
Ribosome biogenesis [BR:
dho03009
]
Prokaryotic type
rRNA helicases
Dia5BBH33_02390 (cshA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BBK24304
UniProt:
A0A8D4UTE9
LinkDB
All DBs
Position
282771..284324
Genome browser
AA seq
517 aa
AA seq
DB search
MYETFDELGIQPEILQAVKDMGFEEPTPIQKVSIPVALSGKDLIGQAQTGTGKTAAFGIP
VLERIDTTKPGPQAVILSPTRELAIQSAEEINHLAQYLPIHALPIYGGQDIERQFKALRK
KPNIIVATPGRLMDHMKRGTIDLSNVQILVLDEGDEMVDMGFIDDIRTILAAIPEERQTM
FFSATMPGPIRELAETFLKDPEVVKIKAATVTIDLIEQEYIELPDRQKFDALCRLLDMQD
PELAIVFVRTKRRCDEVTEALKKRGYMAEGLHGDLSQQKRDTVVRQFKEGTIDILVATDV
AARGLDISGVTHVYNFDMPQDPEIYVHRVGRTGRAGQTGLATTFVISREMGQLRDIERVI
RRRITRRSVPTLTEVMEENQKAAIESLSEAAQAGGLEQFRESAEELLNDQDSVSLVAAAI
KLLTKQPDVTPVKITEEAPNFRRRSGGGHRRFEGGNRPRRHFEGRGDHEGRGDREGRRFE
GKRGGRHFEGGRGNRPKGPKSPRVQDSNFKLYFKNSD
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaacttttgacgaattaggaatccagccggaaattctgcaggccgtaaaggat
atggggttcgaggaaccgaccccgatccagaaggtctccattccagtagcactttccgga
aaggatctgattggtcaggcacagacaggcacaggcaaaaccgcagcattcggtatccct
gtactggaacgcattgacacaacaaagccaggtccgcaggcagtcatcctttcgccaacc
agagaactggctatccagtccgctgaagaaatcaaccatcttgcacagtacctgccgatc
cacgcactgccgatctacggcggtcaggatattgaacgccagttcaaggcactccgcaag
aaaccaaacatcatcgtagctaccccgggccgtctgatggaccatatgaagcgcggcacg
atcgacctctccaatgtacagattctcgtccttgatgaaggcgatgaaatggtcgatatg
ggattcatcgacgacatccgcacgatccttgctgctattccggaagaaagacagaccatg
ttcttctccgctaccatgcctggaccgatccgtgaactcgctgaaacattcctgaaggac
ccggaagtcgtcaagatcaaggctgctaccgtaaccatcgacctgatcgaacaggaatac
atcgaactgccggaccgtcagaaatttgacgcactctgccgtctgctcgatatgcaggat
cccgaactggctatcgtattcgtacgcaccaagcgccgctgcgatgaagtcaccgaagct
ctgaagaagagaggctacatggccgaaggtcttcacggcgacctgtcccagcagaagaga
gacaccgtcgtacgccagttcaaggaaggcaccattgatatcctcgttgctaccgacgtc
gctgccagaggccttgatatttccggcgtcacacacgtttacaacttcgatatgccgcag
gatccggaaatctatgtacaccgcgtaggccgtacaggccgcgcaggacagaccggtctt
gctacgacattcgtcatttccagagaaatgggccagctgcgtgacatcgaaagagtcatc
cgccgccgcattacccgccgctctgtaccgacactgaccgaagtcatggaagaaaaccag
aaggctgccattgaaagcctttccgaagcagctcaggctggcggactcgaacagttccgc
gaaagcgccgaagaactcctgaatgaccaggactccgtatccctcgttgcagcagctatc
aaactgctgaccaaacagccggacgttactccggtcaagatcacggaagaagctccgaac
ttcagaagaagaagcggcggcggacaccgtcgtttcgaaggcggaaaccgcccgagaaga
cacttcgaaggacgcggcgaccatgaaggccgcggcgacagagaaggacgccgtttcgaa
ggaaagcgcggaggccgtcatttcgaaggcggtcgcggcaatcgtccgaaaggaccgaag
agcccgagagtgcaggactccaatttcaaattatacttcaagaactctgactga
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