Dialister hominis: Dia5BBH33_02710
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Entry
Dia5BBH33_02710 CDS
T06439
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dho
Dialister hominis
Brite
KEGG Orthology (KO) [BR:
dho00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Dia5BBH33_02710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dho03021
]
Dia5BBH33_02710
Transcription machinery [BR:
dho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dia5BBH33_02710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
Sigma70_r1_1
HTH_24
KORA
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
BBK24336
UniProt:
A0A8D5A0Z0
LinkDB
All DBs
Position
314469..315674
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AA seq
401 aa
AA seq
DB search
MATKAAQLEQWLKDLKERVNADGNISYNEIINFTKENNLTQKQLDSVFTLLHDHHIEMVY
DEPEETEEGPTEADFAGEEGEDILSDDMLLDGDDDTQEEEKSWDVEDTTDADYNAAAGGV
SDPVRLYLRECGSNPLLSAEQEMELAKTIEKGKKEDATPEEKEAALEAKKEMANANLRLV
VSIAKKYPGRGMPFLDLIQEGNIGLLKAVDKFDYTKGYKFSTYATWWIRQAITRSIADQA
RTIRVPVHMVETINKMNRVGRRFLQEHGREATNEELSKEMGISLEKIREAKKAAQDPISL
ETPIGEKEDSHLGDFIEDQKTASPEDEAAATMRREQVYSMLDTLTEREKGVLALRFGMDD
GTPRTLEEVGKHFGVTRERIRQIEGKALKKLKKQALPMTGY
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
ttggctacaaaggcggcacagcttgagcagtggttgaaagatctcaaggagagagtcaac
gcggatggaaatatttcctacaatgaaatcatcaatttcacgaaggaaaacaatttgacc
cagaaacaactggacagcgttttcactcttcttcatgatcatcatattgaaatggtttac
gatgaaccagaggaaacggaagagggaccgacagaagcagatttcgcaggagaagaaggg
gaagacatcctatctgacgatatgcttcttgacggtgatgacgatacacaggaagaagaa
aaatcctgggacgtggaagatacaacggatgctgattacaatgcggcagccggcggcgta
agtgatccggtacgcctgtacctgcgtgaatgcggctccaatccgcttctttccgcagaa
caggaaatggaactggcaaagacgatcgaaaaaggcaagaaggaagatgcgaccccggaa
gagaaggaagcagctctggaagccaagaaggaaatggcaaacgccaacctccgtctggtc
gtatccattgccaagaagtacccgggacgcggcatgcctttcctggatctcattcaggaa
ggaaatatcggccttctgaaggccgtcgacaagttcgactacaccaagggctataaattc
agtacatatgcgacatggtggatccgccaggcgatcacgcgctccattgccgaccaggca
agaacgatccgcgtgcctgtccacatggtcgaaacaatcaataagatgaaccgcgtaggc
cgccgtttcctgcaggaacacggccgcgaggcaacgaacgaggaactgtccaaggaaatg
ggcatcagccttgaaaagatcagggaagccaagaaggctgcccaggatccgatttccctg
gaaacgccgatcggcgaaaaggaagattcccatctgggagacttcatcgaagaccagaag
acagcttccccggaagatgaagcagcagcaacgatgcgccgcgagcaggtctacagcatg
ctcgatacgctgaccgaaagagaaaaaggagtcctcgccctgcgctttggcatggacgac
ggaacaccaagaactctggaagaagtcggcaagcacttcggcgtcactcgtgaacgtatc
cgccaaatcgaaggaaaggcgctgaagaagctcaaaaagcaggcactcccgatgaccgga
tattga
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