Dialister hominis: Dia5BBH33_04280
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Entry
Dia5BBH33_04280 CDS
T06439
Name
(GenBank) hypothetical protein
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dho
Dialister hominis
Pathway
dho03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dho00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dia5BBH33_04280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dho03021
]
Dia5BBH33_04280
03400 DNA repair and recombination proteins [BR:
dho03400
]
Dia5BBH33_04280
Enzymes [BR:
dho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dia5BBH33_04280
Transcription machinery [BR:
dho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dia5BBH33_04280
DNA repair and recombination proteins [BR:
dho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dia5BBH33_04280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
BBK24493
UniProt:
A0A8E4G0C5
LinkDB
All DBs
Position
466541..470677
Genome browser
AA seq
1378 aa
AA seq
DB search
MLDVNEFDSMKIGIASPEKILEWSHGEVTKPETINYRTLKAETDGLFCEKIFGPTKDWEC
KCGKYKKMRYKGTICDKCGVEVTSSKVRRERMGHIALACPVSHIWYFKGTPSRIGLILEI
APRQLERVLYFAAYIVLDPGDTNLSKKQVLNETEYQTAVATYGKGSFKAQMGAEAIQYLL
KELDLPALEKALKKEIEEGSGQRKVKCIRRLEEVEAFLHSGNKPEWMILTVLPVIPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLELGAPEIIIRNEKRMLQEAVDALIDNG
RRGRAVSGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK
EMAIELFKPFIMHELIKRGIVINLKAARKKVDKLAPEVWDVLGDVIKEHPVLLNRAPTLH
RLGIQAFEPILWEGRAIKLHPLVCPGYNADFDGDQMACHLPLSVEAQAEARTLMLSINNI
LSTKDGKPVAIPSQDMILGSYYLTIVETAADNKVDFTPEEKAAHPDASFDPAKEWKKAED
EMDTSHLHAYTGYDEVMLAYALHEIRIHDFIKVHIPKEDRPDGFNDDDSDLVISTPGRLI
FNYAIPRELRYFYKRHEKRVDENGNVTEVVNNGLGVTIGKKQMGKLVNDCFKKLGFKATG
DLLDSVKSLGFHYALVSGISIGIYDVAVPPEKDGILEDGDEKVEQIKRYFRRGLMTDDER
YRRVVEIWSAKTDEVGAAMKSSMRKFNPLTMMAQSGARGNDNQIRQLAGMRGLIADTSGK
TVELPVKANFREGLTVLDYFTSSHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREED
CDVQVLNFDREEGILASRPDVKNTILGLKPTLLGSVLDEDIIDRRSGEILLVKGKTLDAD
DVTLLNRHLVESVTVVIPSADAEPETKTFDLGTAEAVKEYDHAMRHHLTVHFAGKALEED
ALDRSGNVVLTAGTVIDADAAEKILAADVPVIRVRMDECEGVEVMKIEENNRLIESLADR
ISGRCPLEDVVNPQTGEIIAKKNVEITDEQASEIEKYYDRLKIRSMLTCHSAHGVCAKCY
GRNLATGRHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASAEDITQGLPRVEELFEA
RKPKGNAIISKISGTVSITSAEDNPNVKIITISNDEQSESEKIPVAKKIIVQDGQHIEAG
TRLFEGNINPHDILEVLGVQATQDYIVNEVQKVYRSQGVEINDKHIEVIAHQMLRKIKII
EPGDSGWLPGEVVDIVAYRGMNGRLEDEGKKPSQGINLLLGTTKAALATDSFLSAASFQE
TTRVLTEAAIKGKEDPLLGLKENVIIGKLIPAGTGMSRYRKLKVVHNAEPPAPAEKAE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
ttgttagatgtaaacgaatttgattccatgaaaatcggcatcgcttctccggaaaagatc
ctcgaatggtcccacggcgaagtaacgaaaccggaaacgattaactacagaaccctgaag
gctgaaaccgatggtctcttctgcgagaaaattttcggaccgacaaaggattgggaatgc
aaatgcggcaaatataagaagatgcgttataaaggcaccatctgcgacaagtgcggtgtc
gaagtaacgagctccaaggttcgccgtgaaagaatgggccacattgccctggcatgcccc
gtttctcatatctggtatttcaagggtaccccgtcccgtatcggattgatccttgaaatc
gctccgcgtcagctggaaagagttctctatttcgcagcttacatcgtcctggatccggga
gacaccaacctctccaagaaacaggtcctgaacgaaactgaataccagactgccgttgct
acttacggcaaaggctcattcaaggctcagatgggcgctgaagctatccagtaccttctg
aaggaactggatctgccggctctcgaaaaagccctgaagaaggaaatcgaagaaggcagc
ggccagcgcaaggtaaaatgcatccgccgtctggaagaagtcgaagcattccttcattcc
ggcaacaagcctgaatggatgatcctgaccgttcttccggtcattcctccggatctgcgc
ccgatggttcagctcgatggcggccgtttcgctacctccgacctgaatgatctctaccgc
agagtcatcaacagaaacaaccgtctgaagagacttctggaactcggtgctccggaaatc
atcatcagaaacgaaaagcgtatgctgcaggaagcagtcgatgcgctgatcgataacggc
cgccgcggcagagccgtatccggcccgggaaacagaccgctgaaatccctctccgatatg
ctgaagggcaaacagggccgtttccgtcagaacctgcttggtaaacgtgtcgactattcc
ggacgttccgttatcgtcgtaggtcctgaactgaaaatgtaccagtgcggtctgccgaag
gaaatggcaatcgaactcttcaagccattcatcatgcatgaactgatcaagagaggcatc
gtcatcaacctgaaagctgcccgcaagaaagtcgacaagctcgctcctgaagtctgggat
gtccttggcgacgttatcaaggaacacccggttctcctgaaccgcgctcctacacttcac
agactcggtatccaggcatttgaaccgatcctctgggaaggccgtgcaatcaaactgcat
ccgctcgtatgtccgggctacaacgccgacttcgacggtgaccagatggcatgccatctg
ccgctgtccgtagaagcacaggccgaagcaagaacgctgatgctttccatcaataacatc
ctttcgacaaaagacggcaagccggttgctattccttctcaggatatgatcctcggatcc
tattacctgaccatcgtggaaacagcagcagacaacaaagtcgacttcacgccggaagaa
aaagctgctcatccggatgcttccttcgatcctgccaaggaatggaagaaggctgaagat
gagatggatacctcccatctgcatgcttacactggttatgacgaagtcatgctggcttat
gcactgcacgaaatccgcatccatgatttcatcaaagttcacatcccgaaggaagaccgt
ccggacggattcaacgatgatgattccgatcttgtcatttctaccccgggccgcctgatt
ttcaactatgcgatcccgagagaactccgttatttctacaagcgtcatgaaaagagagtc
gacgaaaacggcaatgtcaccgaagttgtcaacaacggcctcggcgtcaccatcggcaag
aagcagatgggcaagctcgtcaacgactgcttcaagaagctcggcttcaaggcaaccggc
gatctgcttgactccgtcaagtccctcggcttccattacgctctcgtatccggtatttcc
atcggcatctacgacgtagccgttccgcctgaaaaggatggaatcctcgaagacggcgat
gaaaaggtagaacagatcaagagatacttcagacgcggcctcatgaccgacgacgaaaga
tacagaagagtcgtcgaaatctggagtgcaaagaccgacgaagtcggcgctgctatgaag
agctccatgagaaagttcaacccgctgaccatgatggcacagtccggcgcccgtggtaac
gacaaccagatcagacagctggccggcatgcgcggcctgatcgccgatacatccggtaag
accgttgaactgccagttaaggcaaacttccgtgaaggtctgaccgtactggattacttc
acatcttcccacggcgcccgcaagggtctggccgataccgcactgcgtacagcagactcc
ggttacttgacccgccgtctcgtcgatgtctcccaggacgtcatcgtccgcgaagaagac
tgcgacgtacaggtactgaacttcgaccgtgaagaaggcatcctcgcatcccgtccggat
gtaaagaacaccattctcggcctgaaaccgacactcctcggatccgtactcgatgaagac
atcatcgaccgcagaagcggtgaaatcctcctcgtcaagggcaagaccctcgatgctgac
gatgtcaccctcctgaaccgccatctggttgaatccgtcactgtcgttattccaagcgct
gatgctgaaccggaaacgaagacattcgacctcggcaccgctgaagctgtcaaggaatat
gatcacgctatgcgtcatcacctgaccgttcatttcgcaggcaaggctcttgaagaagac
gctcttgaccgcagcggaaatgttgttcttacagcaggcaccgtcattgatgctgatgct
gctgaaaagattctggccgctgacgttccggtcatccgtgtacgcatggatgaatgtgaa
ggcgtcgaagtcatgaagatcgaagaaaacaaccgcctgatcgaatctctggcagaccgc
atctccggacgctgcccgctggaagatgtcgtgaacccgcagactggcgaaatcatcgct
aagaagaatgtggaaatcactgacgaacaggcttctgaaattgaaaagtactatgacaga
ctgaagatccgctctatgctgacctgccactctgcacacggcgtctgcgctaagtgctac
ggcagaaacctggcaacaggccgtcacgtagaaatcggcgaagctgtcggcatcattgcc
gctcagtccatcggcgaaccaggtacacagctgaccatgcgtacattccataccggcggc
gttgcttccgcagaagatattacacagggtcttccacgtgtcgaagaattgttcgaagca
cgtaagccgaagggcaatgctatcatctccaagatcagcggtactgtatccattacaagt
gctgaagataacccgaacgtcaagattatcacgatctccaacgatgaacagtccgaaagc
gaaaagatcccggttgccaagaagatcattgtccaggatggacagcacatcgaagctggc
acacgtcttttcgaaggcaacatcaacccgcacgatatcctcgaagtactgggtgtccag
gctactcaggattacatcgtcaacgaagtccagaaggtttaccgcagccagggcgttgaa
atcaacgataagcacatcgaagtcatcgctcaccagatgctccgtaagatcaagatcatc
gaaccgggcgattctggctggctcccgggcgaagtcgtcgacattgtcgcataccgcggc
atgaacggacgtctggaagacgaaggaaagaaaccgtcccagggcatcaacctgctcctc
ggcacgacaaaggcagctcttgctaccgactcctttctctccgccgcatccttccaggaa
acgacccgcgttcttaccgaagccgctatcaagggcaaggaagatccactcctcggtctg
aaggaaaacgtcatcatcggcaagctgattcctgccggtacaggcatgtcccgttaccgc
aagctgaaagtcgttcacaatgctgaacctccggctcctgcagaaaaagctgaataa
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