Dialister hominis: Dia5BBH33_10980
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Entry
Dia5BBH33_10980 CDS
T06439
Symbol
pcrA_2
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dho
Dialister hominis
Pathway
dho03420
Nucleotide excision repair
dho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dia5BBH33_10980 (pcrA_2)
03430 Mismatch repair
Dia5BBH33_10980 (pcrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dho03400
]
Dia5BBH33_10980 (pcrA_2)
Enzymes [BR:
dho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dia5BBH33_10980 (pcrA_2)
DNA repair and recombination proteins [BR:
dho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dia5BBH33_10980 (pcrA_2)
MMR (mismatch excision repair)
Other MMR factors
Dia5BBH33_10980 (pcrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
PhoH
Cytomega_TRL10
Motif
Other DBs
NCBI-ProteinID:
BBK25163
UniProt:
A0A8D5A1E7
LinkDB
All DBs
Position
complement(1175507..1177717)
Genome browser
AA seq
736 aa
AA seq
DB search
MSNYLNTLNDQQLRAVKQIDGPVLILAGAGSGKTKSLTCRIAYMMESGISPSEILAITFT
NKAAQEMRERIHALVGPSADKIWMYTFHSFGARFLRREISNYPPYNDKFTIYDSDDSKTL
IKNILKELNLDDKQFQPNIIQAHISSAKGQLLEPKAFRAQVGSNFFAQKVADVYESYDKH
LKQNNALDFDDLLFMTTKLLSIESIRRRWQDRFHYILIDEYQDTNHAQYLMAKLIAGKNQ
NICAVGDADQSIYSWRGADLRNIIDFQQDYPSAKVIKLEQNYRSTQTILDAANAVIQNNS
GRPSKRLWTENNQGKPLILYTASDEHSEADFIVNTMRKEHNEEHQLYGNMAVLYRMNAQS
RVIEEALVKSGIGYTMVGGTRFYDRAEIRDMLAYLKLVSNLKDNVSLMRIINVPKRGIGA
ATVQKLSDYANERNTSMFEAMMDLDGLDVSSSTKTKLQNFIAMMFEFLNASTETNVFGLL
QKIMTDTKYLEQLQESKDPQVQSREENLGELLSVAKDFNNDNPEGGVSDFLEKVALVNDV
DTYENENDRVTLMTIHSAKGLEFPIVFLAGMDEGIFPGVRSLMDESKLEEERRLCYVALT
RAKEKLYLSNAHMRTMYGQIKPYLPSRFIDEIPQDLLTHVESDERQDRAFQARRRETASR
VDYAMSEVSVVNKPKPQKEPKRYDWKVGDTAVHNLWGKGKVVAVMGSDSKMMLKIEFPGN
KIRQVMVAFAPITKGE
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaattatttaaacacattaaacgaccagcagttgagagcggtaaagcagatagac
ggaccagtcctgatcctggcaggggccggttcaggcaagacgaagtcattgacctgcagg
attgcctacatgatggaatcgggaatcagtccgtctgaaattctggcaatcactttcaca
aacaaggctgcccaggaaatgagggaacgtattcatgctcttgtggggccttctgctgac
aaaatctggatgtatacatttcattccttcggcgcaagattcctcagacgtgaaatcagc
aattatcctccatataatgataaatttacgatttatgattcggatgattccaaaacactc
ataaaaaatatacttaaggaactgaatctggatgacaagcagttccagcccaatatcatt
caggcgcatatatcttcagcaaagggccagctgcttgagccgaaagcattccgcgcgcag
gttggatcgaacttctttgcacagaaggttgccgatgtatatgaatcttatgacaagcat
ctgaagcagaacaatgcgcttgacttcgacgacctgcttttcatgacgacaaagctctta
tcgattgaatcaatccggagacgctggcaggacagattccactatattttgatcgatgaa
tatcaggatacgaaccatgcacagtacctgatggcaaaacttattgcaggaaagaatcag
aatatctgtgcagtcggtgatgctgaccagagtatttattcctggcgcggcgccgatctc
aggaatatcattgatttccagcaggattatccgtctgccaaggtgatcaaacttgaacag
aactaccgctcgacgcagacgattctggatgcggcaaacgcagtcattcaaaataactcc
ggaagaccgtccaagcggttatggacagaaaacaaccagggcaagcctcttatcctctat
acagcttccgatgagcacagtgaagctgatttcatcgtaaatacgatgagaaaagaacac
aatgaggagcatcagctgtatggaaatatggctgtcttgtaccgtatgaatgcgcagtcg
cgagtcattgaagaagcgctcgtaaaaagcggaatcggatatacgatggtcggagggacg
agattctatgaccgcgcagaaatccgtgatatgcttgcatacctcaagctggtatccaat
cttaaagataatgtcagccttatgcgtatcatcaatgtccccaagcgcggaataggggcg
gcaaccgtacagaagctttccgattacgccaacgaaagaaatacatccatgttcgaagca
atgatggatctggacgggcttgatgtctcttcatctacgaagacaaagctccagaacttc
atagccatgatgtttgagttcctgaatgcatctaccgagacgaatgtctttggcctgctt
cagaaaataatgacggatacgaagtatctggaacagctgcaggaaagcaaggatccgcag
gtacagagccgtgaggaaaaccttggtgaacttctctctgttgccaaggatttcaataat
gataatccggaaggcggagtatcagatttccttgaaaaggttgctcttgtcaacgatgtg
gatacgtatgagaatgaaaatgacagagtgacactgatgacgatccacagtgccaaggga
ctggaattcccgattgtattcctggccggaatggatgaaggcatattccccggcgtccgt
tctctgatggatgagtccaaactagaagaggaacgccgtctctgctacgtggctttgacc
agagcaaaggaaaagctgtatttatccaatgcccatatgcgcacgatgtatggtcagatc
aagccgtaccttcccagccgttttattgatgaaattcctcaggacctcctgacgcatgtc
gagtctgatgaacggcaggacagggctttccaggcaagaaggcgggagacggccagcaga
gtcgattatgcaatgtcggaagtatccgttgtgaataagccaaaaccgcagaaagagccg
aaacgctatgactggaaggtaggagatacggctgtacataacctctgggggaaggggaaa
gtcgttgcagttatgggatcggacagcaaaatgatgctgaagattgaattcccgggaaat
aagattcgtcaggtcatggttgcatttgctccaataacgaaaggagaatga
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