Dialister hominis: Dia5BBH33_13290
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Entry
Dia5BBH33_13290 CDS
T06439
Symbol
deaD
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dho
Dialister hominis
Pathway
dho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dia5BBH33_13290 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dho03019
]
Dia5BBH33_13290 (deaD)
03009 Ribosome biogenesis [BR:
dho03009
]
Dia5BBH33_13290 (deaD)
Enzymes [BR:
dho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Dia5BBH33_13290 (deaD)
Messenger RNA biogenesis [BR:
dho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Dia5BBH33_13290 (deaD)
Ribosome biogenesis [BR:
dho03009
]
Prokaryotic type
rRNA helicases
Dia5BBH33_13290 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
SWI2_SNF2
AAA_22
Flavi_DEAD
PhoH
Motif
Other DBs
NCBI-ProteinID:
BBK25394
UniProt:
A0A8D4UUZ1
LinkDB
All DBs
Position
complement(1461660..1462943)
Genome browser
AA seq
427 aa
AA seq
DB search
MNAFTALGVSAALTDIMKLQGIVKPTPIQEASIPSIFKGKDVIGRSQTGTGKTLAYLLPV
IQRVDTEKNTTQVLIMTPTRELSRQIFDVLRPFAIKLDIDAADIIGGRTIENQLRKLKRD
PAVIIGTPGRLLDHIRRRSLDLSNVKTVILDEADQMLANGFREDIEALVDETPKKRQVLL
FSATMPDDAKRLARKYMNQPVYIDVAEKAAASTVDQRVYETTKPHKFKLLLKHLNEMNLY
MAVVFCNTREGAHELAEKLQEETNFVVDEIHGDMSQSQRNQVIREFEKAKIQVLVASDIA
ARGLDVEGVTHVFNYDIPRNLEYYVHRIGRTGRAGTSGIAITYATPEDGLLLRKLEKSIS
ETITRYDEKGNVRRVRQGKPAKKVVIPGMYKPTKSKEHKALGHKGKNMRQKRKDKPAQKG
TRGRKKK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcatttaccgcactcggcgtgagtgctgctttaacagatatcatgaaactgcag
gggatcgtgaagccgaccccgatccaggaggcttccattccttccattttcaaggggaag
gatgtcatcggccgttcccagacaggtacgggcaagacgcttgcctacctgctgcctgta
atccagagagtggatacagaaaagaatacgacgcaggtcctcatcatgacgccgacgaga
gaactctccagacagatttttgatgtgctgcgcccctttgccatcaagctcgatatcgac
gctgctgacatcatcggcggacgcacgatcgaaaaccagctgcgcaagctgaaacgcgat
ccggctgtcattatcggcactcctggccgtcttctcgaccatatcagaagaagaagcctc
gatctgtccaatgtaaagacagtcatccttgatgaagcagatcagatgcttgccaatgga
ttcagggaagatatcgaagcgcttgttgatgaaacaccgaagaagcgtcaggtcctcctt
ttctctgcaacgatgcctgatgacgcaaagcgcctcgcaaggaagtacatgaaccagccc
gtctacatcgacgttgcggagaaggcagcggcatccaccgtcgaccagagagtctatgaa
acgacgaaaccgcacaagttcaaactgctcctgaagcatctgaatgaaatgaacttgtac
atggcagtcgtcttctgcaacacgcgcgaaggcgcgcatgagctcgctgagaagctgcag
gaagaaacgaatttcgtcgtcgatgaaatccatggcgacatgagccagagccagaggaac
caggttatccgcgaatttgaaaaggcaaagatccaggtccttgtcgcttcagatattgcg
gcacgcggtcttgatgtcgaaggcgtcacgcacgtattcaattatgatatcccgagaaat
ctggaatactacgtccacagaatcggacgtacgggaagagccggcacatccggcatcgct
attacctatgccactccggaagacggacttcttttgaggaaacttgaaaagtccatttcc
gaaacaatcacccgttatgacgagaagggcaatgtccgtcgcgtcagacagggaaaacct
gccaagaaggtcgtcattcccggcatgtacaagcctacaaagagcaaggagcacaaagct
ctcggccataagggcaagaacatgcgccagaagagaaaggacaagcctgcgcagaagggc
acaaggggaagaaagaaaaagtaa
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