Dissulfurimicrobium hydrothermale: LGS26_00375
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Entry
LGS26_00375 CDS
T07882
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
dhr
Dissulfurimicrobium hydrothermale
Pathway
dhr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dhr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LGS26_00375
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dhr02022
]
LGS26_00375
02035 Bacterial motility proteins [BR:
dhr02035
]
LGS26_00375
Two-component system [BR:
dhr02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LGS26_00375
Bacterial motility proteins [BR:
dhr02035
]
Pilus system
Twitching motility proteins
LGS26_00375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA
AAA_5
AAA_2
AAA_16
AAA_30
TIP49
OKR_DC_1_N
bpMoxR
AAA_19
AAA_22
TadZ_N
Motif
Other DBs
NCBI-ProteinID:
UKL13775
LinkDB
All DBs
Position
complement(82057..83517)
Genome browser
AA seq
486 aa
AA seq
DB search
MKESKLAAPSPGRPVVLVADDDRSLREFLEILLQKDGYDVVLAASGDEALGILKDRADVS
VVLSDIRMPGMDGVALLREVKKVRPQTPVILITAFGSMDSAVSAMKEGALDYITKPFRID
EIRKVIRQAVSFNAGNKGGTVSGGAEAVGAYLPEKAPKAARCDRMLAASPAMLKIFELIP
RVASSPSSVLITGESGTGKELVARAIHNLGNRAGMPFVVVNASGIPENLLESELFGHERG
AFTGALAARRGLFAQADKGTIFLDEIGELSMALQAKLLRVVQEKTFTPLGGEREVRVDVR
IISATNRDLEEEVMARRFREDLYFRLNVIHIHMPPLRERPEDIPILVQYFLDKYSKEQGK
EVQGISSYAMEALTGYHFPGNVRELENIIERSVTLAASNLILPDSLSISRFKEGGKRDPD
TKDADTLQIDPDIPDEGLDMEAFLAEIERRLLLKAMKRANGVKTEAAALLGMNFRAFRYR
LAKHGL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaatcgaaacttgcagcgccgtcccccggcaggcctgtggtcctcgtggcggac
gacgaccggagcctgagggagtttcttgagatactccttcaaaaagatggttatgacgtg
gtccttgctgcttcgggtgatgaggcccttgggatattgaaagacagggccgacgtctcg
gtggtcttgagcgacatccgcatgcctggcatggacggcgttgcgctccttcgggaggtc
aagaaggtgcggccgcagacgccggtcatcctcatcacggccttcggttccatggactcg
gccgtctcggccatgaaagagggcgccctggactacattaccaagcccttccgcatagac
gagatacgcaaggtgataaggcaggccgtttcgttcaacgcaggcaataagggcggcact
gtttcggggggcgcagaggctgtgggggcatatctgcctgaaaaggccccgaaggcggca
aggtgtgaccggatgcttgccgcaagcccggccatgctcaagatctttgaactcatacca
agggttgcatcgagcccgtcgagtgtcctcataaccggggagagcggcacgggaaaggag
cttgtagccagggccatccataaccttggaaaccgggccgggatgccctttgtggtggtg
aatgcgagcggtatacctgagaacctccttgagagcgagctctttggccatgaaaggggg
gcgtttacaggggcgctcgcggcaaggcgtggtctctttgcacaggccgataagggtacg
atcttcctggacgagataggtgagctctcaatggcgcttcaggctaagctcctgcgggtc
gtgcaggaaaagacctttacgccccttggcggcgagcgcgaggtccgggtggatgtgagg
atcatatccgccacgaacagggacctcgaagaagaggtcatggcaaggcgtttcagggaa
gacctgtacttcaggctgaatgtcatccatatccacatgccccccttgagggaacgcccg
gaggacatccccattcttgtgcaatattttctggacaagtactccaaagaacagggcaaa
gaggtacagggcatctcaagctatgccatggaggccctgacaggctaccatttccctgga
aacgtgcgggagcttgaaaacatcatcgagcgcagcgttacgcttgcggcctcgaatctc
atcctgccggacagcctctccatatcgagatttaaagaggggggcaaaagagaccctgat
acaaaagatgctgacaccctgcaaatcgaccctgatattcctgacgaagggctggatatg
gaggcctttctggccgagatcgagaggaggctccttttgaaggccatgaagagggcgaac
ggcgtgaagaccgaggccgcggccctcctcggcatgaatttccgcgccttcaggtacagg
ctggcaaaacatggcctctag
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