Dissulfurimicrobium hydrothermale: LGS26_01575
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Entry
LGS26_01575 CDS
T07882
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
dhr
Dissulfurimicrobium hydrothermale
Pathway
dhr03030
DNA replication
dhr03430
Mismatch repair
dhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGS26_01575 (dnaE)
03430 Mismatch repair
LGS26_01575 (dnaE)
03440 Homologous recombination
LGS26_01575 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhr03032
]
LGS26_01575 (dnaE)
03400 DNA repair and recombination proteins [BR:
dhr03400
]
LGS26_01575 (dnaE)
Enzymes [BR:
dhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGS26_01575 (dnaE)
DNA replication proteins [BR:
dhr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGS26_01575 (dnaE)
DNA repair and recombination proteins [BR:
dhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGS26_01575 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
UKL13972
LinkDB
All DBs
Position
complement(320990..324460)
Genome browser
AA seq
1156 aa
AA seq
DB search
MNFTHLHLHTEYSLLDGAIRLKDLFPTAKKCGYEAVAMTDHGNMYGALNFYEQAMKHDIK
PILGCEMYVAPKGINDKGAKGAKDAGFHLVLLAQDNDGYKNLLRLVSIAHLEGFYYKPRV
DLDLLKEYNKGLIALSACLHGEVAYNMLHGGINEARKKAQIYARIFDGRFYLELQENGIP
EQAEVNKGLMDIGRELGLPIVATNDCHYLNAKDAIAHDVLLCIQTNRTINDKGRMRFSTD
MLYFAPPEEMARRFSYAPEALSITKEIVERCNVTLESGRYHFPVYPIKETESYDGLFEAK
AREGFEKRAKELGLDEETRRLYLARLEEELEVIKDKGFASYFLIVADFINWAKSKGIPVG
PGRGSAAGSLTAYSMGITELDPVRYGLYFERFLNAERASLPDIDVDFCMNRRDEVLDYVT
QKYGGEGYVAQIITFGQMKARAVIRDVGRGLGMQYPVVDRIAKLVPATLNITLDKAIEQE
PRFKELAEKDEQVAKLLEIAKALEGLPRHASTHAAGVVISDRPMVEHLPLTKGQKGETVT
QFDMKCVEKVGLIKFDFLGLKTLTVIDDAIKIIKKHLGVEVDINKIPLDDTDTYELLSRG
DTTGVFQLESPGMKDLIRKMRPSIFTDLIALVALYRPGPLESGMVDQFVKAKHGEIKVKY
LLPELEPILNETYGVIVYQEQVMKIAQTLAGYSLGEGDLLRRAMGKKKPEEMAAQRDRFI
SGAKAKGIPGDKAATVFDLMEKFAGYGFNKSHSAAYALIAYQTAWLKTHYRAPFLASLLS
NELGDTDGVVKYISECKTSGVKVLPPDINRSDEGFTLDGDAIRFGLAAVKNVGVGAIESI
IKERGRRPYDDFEDFCSRVDLRKVNKRVIESLIKCGAFDSLGHKRSQLMEVLDQALDLGQ
AAKKAQDCGQKCLFDGAFEQDVGRPRVGFLKLPNLPEWPESELLSMEKEALGFHISGHPL
DPYRDSLQMMGVVSTEEVVGFPDESRVALAGIIKRKKEIVTKKGERMAFLLLEDLHGSIE
VVCFPELYTKTREALAGDQPIWVKGSCQRDDDEAGLLKIIADAIEPLEEIGKKKTTGLII
ELNGGNTGLWVIEALKDIITNHPGACPIKLAIAMPGKGKVTLKLPESLNVALDNEFSAAV
NNLVGYNGLQLEYGQV
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaactttacacaccttcatcttcacaccgaatacagtctccttgatggggccataaga
ctcaaggatctgttcccgaccgcaaaaaaatgtggttatgaggccgtggccatgacagac
catggcaacatgtacggcgccttgaatttttatgaacaggcgatgaaacacgatataaag
ccaattcttggctgtgagatgtatgtagcccccaaggggataaatgacaagggcgcaaag
ggtgcaaaagatgcaggctttcatctcgtgcttcttgcgcaggacaacgacggctacaaa
aacctcttgaggctcgtaagcattgcccatctcgaaggattttattacaagcctagggta
gatctggatttgcttaaggaatacaataaagggctgatcgccctttcggcctgccttcat
ggagaggtggcctacaacatgcttcacggcgggattaatgaagcaaggaaaaaggcacaa
atatatgcaaggatctttgatggacgtttttatctggaactccaggaaaacggcatccct
gagcaagcagaggtaaacaaaggccttatggatatcggcagggagctgggcctcccgata
gtcgccaccaacgactgccattatttgaatgcaaaggacgccatagcccacgatgtgctc
ttgtgcatccagaccaacaggacaataaacgacaagggcaggatgcgcttctcaaccgat
atgctctattttgccccgcccgaggagatggccaggcgtttcagctatgcacctgaggcg
ctctcaattaccaaagagattgtcgagagatgcaatgtcacgctcgaatcgggaagatat
cactttccggtttacccgatcaaggaaactgaaagttatgacggcctgttcgaggccaag
gcgagggagggttttgaaaaacgggctaaggagctcgggctcgatgaagagacccgaagg
ctttatctggcgaggctcgaagaggaacttgaggtcataaaagacaaaggcttcgcctca
tattttctcatagtcgccgacttcatcaattgggccaagtccaaagggataccggtaggg
cctgggcgcggttcagccgcaggttcactgacggcctactcgatggggatcaccgagctc
gatccggtgcgctacggcctctatttcgagcgctttcttaatgccgaaagggcatccctg
cccgatatagacgtggatttctgtatgaaccgcagggatgaggtcctcgactatgtaacc
caaaaatacggtggggagggatatgtagcccagatcatcacattcggccaaatgaaggca
agggcggtcataagggatgtaggccgcggtcttgggatgcaatatccggtagtagaccga
atagcaaaacttgttccagccacgcttaatataaccctcgacaaggccatcgaacaggag
ccaaggtttaaggaactggctgaaaaagacgagcaggtcgcgaagctcctggaaatagca
aaggcgcttgaaggtctcccgcgccacgcctcgactcacgctgccggcgtggtcatatcg
gacagaccaatggttgaacatttaccgctcacaaaaggtcaaaagggtgagacggtcacg
caattcgacatgaagtgtgttgaaaaggtagggctcatcaagtttgactttttgggtctc
aagacacttactgtaatagacgatgcaataaagatcatcaaaaagcaccttggggtcgag
gtcgatataaacaagatacctcttgacgatactgatacttatgaactcctgtctaggggt
gacacgaccggtgttttccagcttgaaagtccgggcatgaaggatctcataagaaagatg
cggccgtcaatattcaccgatctgatagcccttgtagcactgtacaggccaggtcctctc
gaaagcggaatggtagaccaattcgtaaaggcgaaacacggcgaaataaaggttaaatac
ctgctgcccgaattggagccaatcttaaacgagacatatggcgtaatcgtatatcaggag
caggtcatgaagatcgcccagacgcttgccggttatagcctcggtgaaggcgatcttctg
agacgcgctatgggaaagaaaaagccggaagagatggctgcccagcgggaccgcttcatc
tcaggcgccaaggccaagggtataccaggcgataaggcggcgaccgttttcgatctcatg
gaaaaattcgcaggctatggtttcaacaagagccattccgctgcctatgcgttgatcgca
tatcagactgcttggctcaagacccattacagggcacctttcctcgcctcgctcctttca
aacgaattgggtgacacggatggcgtagtaaagtacatcagcgaatgcaaaacaagcggc
gtaaaggtgctgccgcctgatataaatcggagtgacgagggttttaccctggatggcgac
gccatacgcttcggcctggcggcagtcaaaaatgtaggggtaggtgccatagagtccatt
ataaaagaacgcggacgtcggccatacgacgactttgaagacttctgttcaagggtagat
ttaagaaaggtgaacaaaagggttattgagagcctgataaaatgcggtgcttttgattcg
ctgggacataaacgctctcagctgatggaggtcctggatcaggcactcgatctcggccag
gctgcaaaaaaggcccaagactgtggccagaaatgcctttttgatggcgcttttgagcag
gatgtcggcaggcccagggtcggattcctcaagctgccaaatctacctgagtggcctgaa
agcgagcttctttcaatggaaaaggaggccttaggttttcatataagcggtcatccactt
gacccatatagagatagcctgcaaatgatgggcgtggtctctacagaagaggtggttggt
ttccccgatgaaagcagggtggccttggcaggcataataaagagaaagaaggaaatcgtc
acaaaaaaaggggagcgcatggcctttctgctgcttgaagacctgcatggctccattgag
gtcgtatgcttccctgaactttatacaaagacgagggaggccttggctggagaccagcca
atttgggtgaaggggtcatgccaaagggacgatgacgaggctggattgctgaagattata
gccgatgcaatagaaccgcttgaggagatcggtaaaaagaagaccacaggtcttataata
gaattaaacggtgggaataccggcctatgggtcattgaagcactcaaagacataataacc
aaccatcccggggcctgtccgatcaaattagccatagctatgccagggaaaggcaaggtg
acgctgaagttgccggaaagccttaatgtcgccctggacaacgaattttccgctgccgta
aataaccttgtaggttataatggactccagctggaatacggtcaggtataa
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