Dissulfurimicrobium hydrothermale: LGS26_02325
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Entry
LGS26_02325 CDS
T07882
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
dhr
Dissulfurimicrobium hydrothermale
Pathway
dhr00521
Streptomycin biosynthesis
dhr00523
Polyketide sugar unit biosynthesis
dhr00525
Acarbose and validamycin biosynthesis
dhr00541
Biosynthesis of various nucleotide sugars
dhr01100
Metabolic pathways
dhr01110
Biosynthesis of secondary metabolites
dhr01250
Biosynthesis of nucleotide sugars
Module
dhr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dhr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LGS26_02325 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LGS26_02325 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LGS26_02325 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LGS26_02325 (rfbB)
00525 Acarbose and validamycin biosynthesis
LGS26_02325 (rfbB)
Enzymes [BR:
dhr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LGS26_02325 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
UKL14110
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Position
complement(490700..491773)
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AA seq
357 aa
AA seq
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MILVTGGAGFIGSNFVVDWLSKGDEPVVNLDKLTYAGNLENLIHLKDDPRHIFVQGDIND
RKLISALFAGHRPRAVINFAAETHVDRSIHAPDDFIKTNINGTFNLLSEALTYWQGLNEE
ARAQFRLLHISTDEVYGSLGPDDPPFTESSPYAPNSPYSASKAASDHLVRAFHRTYGLPT
LITNCSNNYGPYQFPEKLIPLVILNAVEGKPIPIYGDGLNVRDWLYVGDHCEALKIVLAK
GRPGETYNIGGGSEKTNLDVVHTICTILDELRPDPKGKGYSSLITNVKDRPGHDRRYAID
AGKLKCETGWQPKENFKDGIRKTVTWYLEHMDWVQNIKTGTYKAWMALNYGDRGWNP
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatacttgtaaccggaggcgccggctttatcgggtcaaactttgtcgtggactggctc
tctaaaggcgatgagccggttgtaaacctggacaagctcacctatgccggaaatcttgaa
aaccttatccatcttaaagacgacccaagacacatctttgtccagggcgacataaacgac
cgtaagcttataagcgccctgtttgcagggcacaggccgcgggccgtcataaacttcgcc
gcagagacccatgttgaccgctctatccatgcacccgatgatttcataaagaccaacata
aacgggacattcaatctccttagcgaggccttgacatattggcaaggcctaaacgaagag
gcaagggcgcaattccgcctccttcacatctcgactgacgaggtctacggttccctcggg
cctgatgacccgccctttacagagtcatccccctatgcgccgaacagcccgtattccgca
tcaaaagcggcgtccgaccatctggtgagggcatttcaccgcacatacggcctccccaca
ctcatcaccaactgctcgaacaattacggcccttatcagttccctgaaaagctcatcccc
cttgtgatccttaacgccgtcgaaggcaaaccgattccgatatatggagatgggctaaac
gtacgtgattggctctatgtcggcgaccactgcgaggcgctcaagatcgtcctggccaaa
ggcagaccgggcgagacctacaacataggcggcggcagcgaaaagaccaatctggatgtc
gtacacactatctgcaccatattggacgagctgcgtcccgatccaaaaggcaagggctat
tcatccctgataaccaatgtcaaggacaggcctggccacgaccgccgctatgctattgat
gcaggcaagctgaagtgcgagacaggctggcagccaaaagagaattttaaagatggcatc
cgtaagacggtaacttggtatctggagcacatggactgggtgcaaaacataaaaaccggg
acatacaaggcatggatggcgctcaattacggcgatagggggtggaatccatga
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