Dissulfurimicrobium hydrothermale: LGS26_04560
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Entry
LGS26_04560 CDS
T07882
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dhr
Dissulfurimicrobium hydrothermale
Pathway
dhr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dhr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LGS26_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhr03021
]
LGS26_04560
Transcription machinery [BR:
dhr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LGS26_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Homeodomain
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UKL14508
LinkDB
All DBs
Position
complement(931794..933284)
Genome browser
AA seq
496 aa
AA seq
DB search
MKRDNVAGCMVISKEAQNEFDSAPIEIFEDPESVVAPGEECISITDIPAVQAPKAPDVDP
LKIYLKEMKDSKPFDREEEIAVSRAIEEGEALMMKTAFSILPIAEAVLKEISASSKTKSC
RPTDIQQDQNQCDADEKITGNTLNKKHIWEIARKIKPILEENRDLVGLLRNRETAEDDEE
VKAIRLKLFKNSEAIAGLFEGVRVEKALLNVTSRIFKEERDRLNCITDKTLFEESGLTRA
EFDRISFLHQKGCTEASTAKDKLIQANLRLVVSIAKKYSHHGLQLADLIQEGNIGLIKAV
EKFEYKRGYKFSTYAIWWIRQAITRAIAEQSRTIRVPVHMVETMNRVIRKINDLFQEKGG
EPTIEDVARHTGLSEAKVEMIFQMTRDPISLETPVGAGDESHLADFIEDLNVQSPDRLAL
DQSLAEQMRLTLSTLTPKEEKVLRMRFGIGEQSDHTLEEVGKSFMVTRERIRQIEAKAIR
KLKHPLRNAMLKVFFE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagacaatgtagccggctgtatggtcatatcaaaggaggcgcagaatgaattc
gacagcgcaccgatcgaaatctttgaagatcctgaatcggttgtcgcaccaggagaagaa
tgcatatcaataacggatatacccgcggtccaggcgcccaaggcgccggatgtcgaccca
ttgaaaatatatctgaaggaaatgaaggacagcaagccctttgatcgcgaagaggaaata
gcagtctccagggccatagaagaaggcgaagcgctcatgatgaagacggccttcagtatc
ctacctatagcggaagccgtcttaaaagaaatatccgcctcatccaagacaaaatcttgc
agaccaacagatatacagcaagaccaaaatcagtgcgatgcagacgaaaagataactggc
aataccctcaataaaaaacatatctgggaaatcgccaggaaaatcaagcctatacttgaa
gaaaaccgagatctagtcggcctcctgcgcaaccgcgaaacggccgaagacgatgaagaa
gtaaaggcgatcaggctcaagctatttaaaaatagcgaggcaatagcaggcctattcgaa
ggcgtcagggttgaaaaggccttgctgaatgtaacctccaggatattcaaagaagaacgg
gacaggctaaactgcatcacggacaagacgctctttgaggaaagcggacttactagggcc
gaattcgaccggatttcgtttctgcatcaaaagggctgtacagaggcctccacggcaaaa
gacaagctcatacaagccaaccttagattggttgtaagcatagcaaaaaaatactcacac
catggactccagcttgccgacctcattcaggaaggcaacatcggcctaataaaggcggtt
gaaaagtttgaatacaaaaggggttacaaattcagcacctatgccatctggtggataaga
caggccatcacaagggctatagccgaacaatcgcggactatcagagtgccggtccacatg
gttgaaactatgaacagggtcatacgcaagataaacgatctcttccaggaaaagggtggg
gaaccgaccattgaagacgtagccaggcataccggtctttcagaggcgaaggtagagatg
atatttcaaatgaccagagaccctatttcacttgagacaccggttggggcgggcgacgag
agtcatttggcggacttcatcgaagaccttaacgtccaaagtcctgatcgtcttgcatta
gaccagagccttgcggaacagatgcgtctgaccctctccaccctaacgcctaaggaggaa
aaggtcttgagaatgagatttggaataggagaacagagcgatcacacgcttgaggaggta
ggaaagagctttatggtgacgagggaacgtataagacagatcgaggcaaaggccatcagg
aaactcaaacaccctttgagaaatgcgatgctcaaggtgttttttgaatag
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