Dissulfurimicrobium hydrothermale: LGS26_08110
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Entry
LGS26_08110 CDS
T07882
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
dhr
Dissulfurimicrobium hydrothermale
Pathway
dhr03030
DNA replication
dhr03430
Mismatch repair
dhr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dhr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGS26_08110 (holA)
03430 Mismatch repair
LGS26_08110 (holA)
03440 Homologous recombination
LGS26_08110 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dhr03032
]
LGS26_08110 (holA)
03400 DNA repair and recombination proteins [BR:
dhr03400
]
LGS26_08110 (holA)
Enzymes [BR:
dhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGS26_08110 (holA)
DNA replication proteins [BR:
dhr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGS26_08110 (holA)
DNA repair and recombination proteins [BR:
dhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGS26_08110 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UKL13432
LinkDB
All DBs
Position
complement(1696779..1697939)
Genome browser
AA seq
386 aa
AA seq
DB search
MKRQINNGHLQGGEDFVQSVSNDEISPCYLFIGQHPLTAPLVQRLITALIGEASLEFNLE
TIAQEACTAGAVLEAVKTRPFSPGRPGRKVVLLQDPPFLTSAGADGRWEAEAQDWEKVFL
WLSSQKDIRSILVIESDCVDKRIGAFSRFKRLGPVVIDVGIGGDSSKDTKNAASAYVNGL
LQRAGKKADKGVVDLILDQVGHDPVALGIEIDKLISLAGPRERIGLDDVREAISRQREEE
VFRLADAILRRDKASAFEVISRLLADDVHPLIILQTIANFLRKMALILAALSDKQGVLSM
QGMTYQVFQKEILPNLKAFWGEPAPHALKGLHPYALYIMYRDAHRFRLEKVLELFARLPD
VDLALKGGQCPSRVILERLILEIIER
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcaaataaataatggtcatttgcagggcggtgaagattttgtccagtcggta
tcaaatgatgagatctcaccttgctatctgtttatcggacagcacccgttgacagcgccg
ttggtgcagcgtctgataacagcgctcatcggtgaggcctctctggaattcaatctcgag
actattgcccaggaggcgtgtacggctggggcagtccttgaggcagttaagaccaggcct
ttctccccaggcagaccaggcagaaaggtggtccttttacaggatccgccgtttttgacc
agtgccggcgcagacggccgctgggaagccgaggcccaggactgggagaaggttttttta
tggctttcgtcccagaaggacatccggtctattctagtcatcgagagcgattgcgttgac
aaaaggatcggcgccttttcaaggtttaaaagacttggccctgtagtaatagatgtagga
ataggtggggatagctcgaaagatacgaaaaatgcggcctccgcctatgtcaatggatta
ttgcaaagggcggggaaaaaggctgacaagggggttgtagacttgatcttggatcaagtg
ggccacgatcctgtcgcgcttggcattgaaattgacaaattaataagccttgcaggcccc
agggaacggatcggtctggacgatgtaagagaggcgatctcgagacagagggaggaggag
gtctttagacttgccgatgcaatcttgagacgcgacaaggcctcagcgttcgaggtaatt
tccaggctattggccgatgatgtccatcctcttataatattgcaaacaatcgccaacttc
cttagaaagatggcgcttatccttgctgcactttcagataagcagggcgtcttgtcgatg
caaggcatgacctatcaagtctttcagaaggaaattcttccaaatctcaaggccttttgg
ggagagcccgctcctcatgcattaaaaggccttcatccctatgcactttatattatgtac
agggatgcacacaggtttaggcttgaaaaggtacttgaactgtttgccaggctccctgat
gtcgatcttgccctaaagggcggacagtgcccttcaagggttatacttgaacgactgatc
cttgagataattgaaagatag
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