Dissulfurimicrobium hydrothermale: LGS26_09395
Help
Entry
LGS26_09395 CDS
T07882
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
dhr
Dissulfurimicrobium hydrothermale
Pathway
dhr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGS26_09395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhr03019
]
LGS26_09395
03009 Ribosome biogenesis [BR:
dhr03009
]
LGS26_09395
Enzymes [BR:
dhr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LGS26_09395
Messenger RNA biogenesis [BR:
dhr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGS26_09395
Ribosome biogenesis [BR:
dhr03009
]
Prokaryotic type
rRNA helicases
LGS26_09395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UKL13660
LinkDB
All DBs
Position
1970388..1971830
Genome browser
AA seq
480 aa
AA seq
DB search
MDHFEQLGLSENMLDVMRKKGFGTPTPIQQKVIPFLLNERRDVLAQAQTGTGKTAAFGIP
IIEQIEARPRHVKALVLVPTRELAIQAAEELNSLKGAKKLKIAPIYGGQAIGLQLKHLQE
GVDIVVGTPGRTIDHLRRGSLRLDKISFLVFDEADEMLDMGFIDEINEIMEFVPAEKQTM
LFSATMPRPVVSIARRYMNEYETISDNQRQQTATLTDQIYFKVSEQDKFEALCRILDMEP
DFYGLIFCRTRTDTENVASRLISRGYKAAIIHGEINQGQREKTMRGFRQRQTNILVATDV
AARGIDVNDLSHVINYALPQDPESYIHRIGRTGRAGKRGAAITFVAPRELRLLDLIRKVS
GAPIRKGSVPKIDDIIKSRRNRLKNEIKTTMQSKDLGTFKIMAAELLKDADPVEVLAACL
NISFGNKLDTCGYNEIQEVDPIDIKDHTRIFMAKGHRPPRKKAARWHQGSRAGKGPDRLK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaacaactcgggctttcggaaaacatgctggacgtgatgcgcaaaaag
ggctttgggacgccaacccccatacaacaaaaggtcatccccttcctgctcaatgaaaga
cgtgatgtcttggcgcaggcgcagaccggcaccggcaaaacggccgccttcggcatccct
atcatcgaacaaatagaggcccgccccaggcacgtaaaggccctggtacttgtgccaaca
agggagcttgccatacaggccgcggaagaactaaatagtctcaagggtgccaaaaaactc
aagatcgcccccatctacggcggtcaagctatagggctgcagctgaaacacctgcaggag
ggcgtcgatatagtcgtaggcacgccaggccgcactatagaccatctgagacgcggttcg
ctcagattggacaagatatcctttctggtattcgatgaagcggacgagatgttggacatg
ggattcatcgacgaaattaatgaaatcatggagtttgtgccggccgagaaacagacgatg
ctcttttctgcaaccatgccgagacctgtagtttcgattgcaaggcgctacatgaacgaa
tatgagaccatttccgacaaccagagacaacagactgcgacccttacagaccagatatac
ttcaaggtcagtgagcaagataaattcgaggccttgtgccgaatcttagacatggaacca
gacttctacggcctgatcttttgccggacacgcaccgatacagagaacgtcgcatccagg
ctcatctcaaggggctataaagctgcgatcatacacggtgaaatcaaccagggccagcgt
gaaaagacgatgcgcggctttcggcaacgacagacgaacatactagtcgccactgatgtg
gccgcacgcggcattgatgtcaacgatctctcccatgtaataaactatgcgctgccgcaa
gatcctgaatcttatatacatcgtataggacgcacgggtcgtgcaggcaagaggggcgca
gccatcacctttgttgcgccgagggagttgcgcctgttagatttgatacgcaaggtctcc
ggcgccccgatccgcaaagggagcgtcccaaaaatcgacgacatcataaaatctagaaga
aaccgccttaaaaacgagataaaaacgactatgcagtccaaggatcttgggactttcaaa
atcatggccgcagaacttctaaaagacgccgaccctgtcgaggtcctcgccgcctgccta
aatatctcgttcggaaacaaactcgatacctgcggctacaatgagatacaagaggtggat
cctatagacatcaaagaccatacaaggatatttatggccaaagggcacaggccccccaga
aaaaaagctgcccgatggcatcaaggatcgagagcaggaaaaggacctgaccgtctgaaa
tga
DBGET
integrated database retrieval system
