Dolichospermum heterosporum: NG743_05205
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Entry
NG743_05205 CDS
T08533
Symbol
sigC
Name
(GenBank) RNA polymerase sigma factor SigC
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
dht
Dolichospermum heterosporum
Brite
KEGG Orthology (KO) [BR:
dht00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dht03021
]
NG743_05205 (sigC)
Transcription machinery [BR:
dht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NG743_05205 (sigC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
GerE
Motif
Other DBs
NCBI-ProteinID:
UUO16443
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Position
1163620..1164852
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AA seq
410 aa
AA seq
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MPATSFYKNAAQEGQNPSSPLDIEINNDDLPDLDMAAVESDLALAAQTSRRSTDLVRLYL
QEIGRVRLLGRDEEVAEAQKVQRYLRMRLLLGAAATEGDAVIVPYARLMEVQERLTSELG
HRPSLERWATTAGINLPDLKPTLANGKRRWAEIANLTVEELEQVQTQGLQAKSHMIKANL
RLVVSVAKKYQNRGLELLDLVQEGTLGLERAVEKFDPTKGYRFSTYAYWWIRQGITRAIA
TSSRTIRLPVHITEKLNKIKKAQRKIAQEKGRTPTLEDLAIELDMTAIQVREVLLRVPRS
VSLETKVGKDKDTELGELLETDTITPEEMLMRESLHKDLHNLLDDLTSRERDVISMRFGL
SDGHAYSLAEIGRALDLSRERVRQIESKALQKLRQPKRRNLVRDYLESLS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaacatctttttataaaaatgccgcccaggaagggcaaaatcctagttcaccc
ttggatattgaaatcaataatgatgatttgccagatttagatatggctgctgttgagtca
gacttagccttagccgcgcaaactagccgacgtagcacagacttggtacgactctatctg
caagaaattggtcgagtccgcttattaggacgagatgaggaagttgctgaagcccaaaaa
gtacagcgatatttacggatgcggttattgcttggtgctgctgccactgagggagacgct
gtaattgtcccttatgcccggttaatggaggtacaggagcggttgacatcagaactagga
caccgcccttctttggaacgctgggcgactactgcggggataaatttacctgatcttaag
ccgactttagccaatgggaaaagacgctgggcggaaattgctaatttaacagttgaagaa
ctagagcaagttcaaactcaaggactacaagccaaatcgcacatgattaaggcgaatttg
cgtttggtggtatctgttgccaaaaagtaccaaaatcggggtttggaattgttagatttg
gtgcaagaagggactttaggtttagaacgagcagttgagaagtttgatcctacaaagggt
tatcgttttagtacctatgcttactggtggattcgtcagggtattaccagggcgatcgct
acttctagccgcactattcgcctacctgtccatattaccgaaaagctcaacaaaattaaa
aaggcgcaacggaaaattgcccaagaaaaaggtcgcactccaactttagaagacctagcc
attgagttggatatgacagctatccaagtccgggaagtgctattgagagttccccggtct
gtgtctttggaaacgaaggtagggaaggataaagatactgaattaggcgaattactggag
actgatacgattaccccagaggagatgttaatgcgagaatctttacataaggatttgcat
aatcttcttgatgatttaaccagtcgagaacgagatgttatttcgatgcgctttggcttg
tccgatggtcatgcctactctttagcagaaatcggtcgcgcccttgatttatcacgggaa
agggtcagacaaattgaatccaaggctttacaaaaacttcgccaacctaaacgtcgtaac
ctagtccgcgactatctagagtcgttaagttag
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