Dolichospermum heterosporum: NG743_15765
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Entry
NG743_15765 CDS
T08533
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
dht
Dolichospermum heterosporum
Pathway
dht03410
Base excision repair
dht03430
Mismatch repair
dht03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dht00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NG743_15765 (recJ)
03430 Mismatch repair
NG743_15765 (recJ)
03440 Homologous recombination
NG743_15765 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dht03400
]
NG743_15765 (recJ)
DNA repair and recombination proteins [BR:
dht03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NG743_15765 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NG743_15765 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NG743_15765 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
HTH_11
Motif
Other DBs
NCBI-ProteinID:
UUO13537
UniProt:
A0ABY5LNK8
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All DBs
Position
3540221..3542533
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AA seq
770 aa
AA seq
DB search
MEWILTGTEQPPDWFIELVKKYVPTTGGNFAAQLFWQRGIQDQEKLAAFINYQIYQPADV
WEFGQEMNLAVQRLITAGKTGEKIVIWGDFDADGITSTAVLWDGLGEFFQQHRQLSYYIP
NRLIESHGLNQPGIDNLAAQGCKLIITCDTGSTNISEIIYAQSLGIDIIVTDHHTLPPER
PPVVAIINPRYLAKEHPLYHLSGVAVAYKLVEALYISLPDIPEHPLTDLLDLVAVGLIAD
LVQLSGDCRYLAQLGIQQLHTDFKKIPSARRRPGVGKLLELCQKSGDRPTDISFGLGPRI
NAVSRIHGDASFCIELLTSRDMQRCQQLAEETELANSRRKSLQKDVQVQVTKKLSQLDLS
TTSVIVLEDPQWAGGVLGLVAGQIAQETGRPTILLSTEAKENKTDSSPSLARGSARSINS
VDLYQLVQEQAHLLHRFGGHPFAAGLSLLVENIPLFTAAINQKLRQSLGGINLTPTVQAD
LVVTVADLGKDLFLELKLLEPCGMGNPIPKLLIKNCWFENSWHKNQEDLKGNKIQYIKTD
FNIRDNSTNNPFPGIWWGHYKEELPIGRCDCIAEIDFNSFKNRYEIRLIAVRPNTESELK
TKNSALILDWRNQENLTELTSEKSLLIMQDCPTNWDNLRLWVKQSLNQRKQLVIAWRKPH
NLTPKDIWLTLLGISKYLSRKNQPVTHVQLLEKLGISDQTLYLGFQALKYLGFIIQRQDN
HLQIIWDSTYHYQPADHVINKFLAAVREEQFQRDYFFHVPLSIIVAMIGK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggaatggattttaacaggaacggaacaacctcctgattggtttatcgaattagtgaaa
aaatacgtaccaacaacaggtggtaactttgctgctcaattattttggcaacggggaatt
caagatcaggaaaagttagcggcttttattaattatcaaatttatcaacctgctgatgtt
tgggaatttggtcaggaaatgaatttggctgtacaacggttaataactgccgggaaaaca
ggagaaaaaattgttatttggggagattttgatgccgatggaattacctcgactgcggta
ttatgggatggtttaggtgaattttttcagcaacatcgtcaattaagttattatattccc
aatcgtttaatagaatctcatggtttaaatcagccaggaattgataatttagcagcccaa
ggttgtaaattaattattacttgtgatacaggcagtacaaatatttcagaaatcatctat
gcccaaagtttagggatagatataattgtgactgaccatcatacattaccaccagaacgc
cccccggtcgtcgccattattaacccgcgttatttagcaaaagaacatcctttatatcat
ctttctggtgtggcagttgcttataaattggtggaagcattatatataagtttgccagat
attcccgaacatccattaacagatttattagatttagtagcagtaggattaattgccgat
ttagtccaattaagtggtgattgtcgctatttggcacagttgggaattcaacaattacac
acagactttaaaaaaatcccatcagccagaagaagaccaggagtggggaagttattagaa
ttatgccagaaaagtggcgatcgccccacagatatttcctttggtttgggaccccgcatt
aacgccgttagtcgcattcatggtgatgctagtttctgtatagaattattaaccagtaga
gatatgcagcgttgtcaacaacttgcagaagaaacagaattagctaattcccgtcgcaaa
tctttacaaaaagatgtccaagtccaagttactaaaaaactcagtcaattagacttatca
accaccagcgtcatcgttttagaagatcctcaatgggcaggtggtgttttaggtctggtt
gccggacaaattgcccaagaaacagggcgaccgacaattttgctaagtacagaagcaaaa
gaaaataagacggattctagcccatctctagcacgaggttctgcccgttccattaactcc
gttgatttatatcaattagttcaagaacaagcccatttattacatcgttttggaggacat
ccctttgctgcgggtttgagtttattagtagaaaatatccccctatttacagccgccatt
aaccagaaattacgtcaatctttaggaggaataaatctcactccaacagtgcaagctgat
ttggtggtgacagttgccgatttaggcaaagatttatttttagaattgaaactattagaa
ccctgtggaatgggcaatcctatccccaaattattaattaaaaactgttggttcgaaaat
tcttggcataaaaatcaagaagatttaaaaggaaataaaatccaatatattaaaactgac
ttcaatattcgagataattctaccaacaatccgtttccggggatttggtggggacactat
aaagaagaattgcctattggtagatgtgattgtattgccgaaattgattttaacagcttt
aaaaaccgttatgaaattagattaatcgccgtccgtcctaatacggaaagtgaattaaaa
accaaaaattcagcattgattttagattggcgaaatcaggaaaatttaaccgaactaacc
tcagaaaaatcattattaattatgcaagattgccctactaattgggataatttacgtttg
tgggtaaagcaatcactaaatcagagaaaacaattagttattgcttggagaaaaccccat
aatttaactcccaaggacatttggttaactttattaggcatttctaaatacctgagtcga
aaaaatcaacctgttacccacgtccaacttttagagaaactaggtattagtgatcaaacc
ctatatttgggttttcaagcattaaaatatttaggatttatcatccaacgtcaagataat
catctacaaataatctgggattccacatatcattaccaaccagcagatcatgttattaac
aaatttttagccgcagtcagagaagaacaatttcaacgagattatttttttcatgtgcct
ttatctattattgttgccatgattggtaaataa
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