Dolichospermum heterosporum: NG743_23165
Help
Entry
NG743_23165 CDS
T08533
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dht
Dolichospermum heterosporum
Pathway
dht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NG743_23165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dht03019
]
NG743_23165
Enzymes [BR:
dht01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NG743_23165
Messenger RNA biogenesis [BR:
dht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NG743_23165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
AAA_22
FANCF
Motif
Other DBs
NCBI-ProteinID:
UUO14877
LinkDB
All DBs
Position
5105865..5107205
Genome browser
AA seq
446 aa
AA seq
DB search
MSFSNLGLSPEIVRAVTERGYDKPTPIQTQAIPVVLSGGDIMAGAQTGTGKTASFTLPLL
HRLSANKGISSNSHGFPPIRALILTPTRELAAQVQESVRDYGKYLNLNSMVMFGGVSIGP
QKQKLRTRVDILVSTPGRLLDHVQQGTVNLSRVEVLVLDEADRMLDMGFINDIRRILSLL
PKQRQNLLFFATFSDKVKTLAAGLLNNPTMIEVARRNVTAATVSQKVYHVDRERKRQLLS
HLIRENKWYQVLVFSRTKHGADRLVKQLGEDRIQALAIHGNKSQGARTHALAKFKDGTLQ
VLVATDIAARGLDISELPHVINYDLPNVPEDYVHRIGRTGRAGAEGQAISLVCVDEHHLL
ADIEQLIEQRLPKEVVDGFGVNPEIKAEPIPNGRKAPSGGGNQRTRRSAPKSASSKSPRQ
PSSRTAAGDKKPGSSSPTPRRSGKRR
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtctttttctaatctcggcttgtccccagaaattgttcgtgctgtcactgagcgggga
tatgataaacctacaccaatccagacacaggctattcctgtggtgttgtctggtggtgat
attatggctggagcgcaaacgggtactggaaaaactgccagtttcactctgccattgtta
catcgtttgtctgcaaataagggcatttctagtaattctcatggatttccgccaattcgc
gccttaattctgactcctactcgtgaactcgctgcacaggtgcaagaaagtgtccgtgat
tatggtaaatatttgaatctgaattcaatggtgatgtttgggggagtgagtattggtccc
caaaaacagaaattgagaacccgtgtagatattttggtttcaactccaggacgattgtta
gatcatgtccaacaaggtactgtgaatttgtctcgtgtggaagtgttggtactagatgaa
gcagaccgaatgctggacatggggtttattaatgatatccggcgtattctttcacttttg
cctaaacagcggcagaatttgctattttttgcaactttctctgataaagttaaaactctt
gcggctgggttactaaataacccgactatgattgaagtcgcacgccgaaatgtgactgcg
gcaacggtatcacaaaaagtttatcatgtggacagagaacgcaaacgccaattactttct
catctaattcgagaaaacaaatggtatcaagtattagtatttagccgcacgaagcatggt
gctgaccggttggtgaagcagttgggtgaagaccgaattcaagcgctcgctattcacggt
aataagagccagggagcgcgaactcacgctttagccaagtttaaagatgggactttgcag
gtattggtagcaacggatattgctgcgcggggtcttgatattagtgaactacctcacgtt
attaattacgatttacccaatgtcccagaagattatgtgcatcgcattggtcggactgga
cgcgctggtgcggaaggtcaagcgatttcccttgtatgtgttgatgaacatcatttatta
gcggatattgaacaactcattgagcagcgtttaccgaaagaggtggtagatggttttgga
gtcaacccagaaattaaagctgaaccaattcccaatggacgcaaagctccttctggtggt
ggaaatcagcggactcgtcgttctgctcctaaatctgcttcttcaaaatcacctagacag
ccttcttcacgcacagccgcaggggataaaaagcctggttctagttctcctacaccacgt
cgttctggtaaacgtaggtaa
DBGET
integrated database retrieval system
