Dolichospermum heterosporum: NG743_24875
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Entry
NG743_24875 CDS
T08533
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dht
Dolichospermum heterosporum
Pathway
dht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NG743_24875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dht03019
]
NG743_24875
03016 Transfer RNA biogenesis [BR:
dht03016
]
NG743_24875
Enzymes [BR:
dht01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NG743_24875
Messenger RNA biogenesis [BR:
dht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NG743_24875
Transfer RNA biogenesis [BR:
dht03016
]
Prokaryotic type
tRNA degradation factors
NG743_24875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
KH_SLS1_2
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
UUO15194
UniProt:
A0ABY5M040
LinkDB
All DBs
Position
complement(5507582..5509738)
Genome browser
AA seq
718 aa
AA seq
DB search
MAEFEKSISFDGRDIRLTVGLLAPQAGGSVLIQSGDTTVLVTATRSAAREGIDFLPLTVD
YEERLYAAGRIPGGIMRREGRPPEKAILASRLIDRPLRPLFPSWLRDDLQVVAITMSMDE
QVPPDVLAVTGASIATLIAQIPFNGPMAAVRVGLVGDDFIINPTYAEIEAGDLDLIVAGS
PDGVIMVEAGANQLPEQDIIEAIDFGYEAVRDLIQAQLDLLDELGLKLVQETPPEVDKTL
ENYIRDRASDEIKKILAQFELTKTDRDIALDAVKDNISAEIKALPEEDPIRIAATADSKA
LGNTFKSITKYFMRRQIVEDNVRVDGRKLDEVRPISCRVGIIPKRVHGSGLFNRGLTQVL
SMCTLGTPGDAQNLNDDLQLEQTKRYLHHYNFPPFSVGETKPLRAPGRREIGHGALAERA
LLPVLPPKDKFPYVIRVVSEVLSSNGSTSMGSVCGSSLSLMDAGVPITKPVSGAAMGLIK
EGDEVRILTDIQGIEDFLGDMDFKVAGTDTGITALQMDMKISGLSLEVIAQAVNQAKPAR
LHILEKMLQTIDTPREETSPFAPRLLTIKIDPDMIGLVIGPGGKTIKGITEETGAKIDIQ
DDGTVTISAVDENRAKRARNIVQGMTRKLHEGDVYIGRVTRVIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAVGDEVIVKVREIDNKGRINLTRLGIHPDQAAAAREAAAVNH
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatttgaaaagtcaatatcctttgatggacgggatattcgactgacggttggc
ctactagccccccaagcaggtgggtcggttttgatacaatcaggagatacaactgtttta
gtaacggctacaaggtcagcagcgcgggaaggcattgattttttgccactgaccgtagat
tacgaagaaagattgtatgcagcaggaagaattccaggggggattatgcgccgggaaggt
cgtccaccggaaaaggcaattcttgccagtcgtctgattgaccgcccactccgtccttta
ttcccttcatggttgcgggatgatttgcaagttgtggcaataactatgtcaatggatgag
caagtcccccctgatgtgttagcagtcacaggtgcttcaattgctactctcattgcccaa
attccttttaatggaccaatggccgcagtgcgagtaggcttggttggtgatgattttatt
attaaccctacctatgcggaaattgaagcgggagatttggatttaatcgttgccggttcc
ccagatggggtaattatggtggaagcgggtgcaaatcaattgccagagcaagatattatt
gaagcgattgattttggctacgaagcggttcgggatttaattcaagctcagttagatttg
ctggatgaactaggtctaaaacttgtgcaagaaacgccaccagaagtagataagacatta
gaaaactatatccgcgatcgcgctagtgatgagatcaaaaaaatcttggcgcaatttgag
ttaactaaaactgatcgtgatattgctttagatgcagtaaaagataatatctctgctgaa
atcaaagccttaccagaagaagaccccattcgcatcgctgccacagccgactccaaagcc
cttggtaataccttcaagagcattaccaaatacttcatgcgtcgtcaaattgtcgaagat
aacgtgcgcgttgatggtcgtaagcttgatgaagttcgtcctatctcttgtcgagttggg
attatacccaaaagagtacatggtagcggtttatttaaccggggactgactcaggtgcta
tcaatgtgtacccttggtactcctggagatgcccaaaatctgaacgacgacttgcaacta
gaacaaactaaacgttacctgcatcactataacttccctcccttctccgtcggcgaaacc
aaaccattacgcgcccctggtagacgggaaatcggacatggtgcattagcagaacgggca
ttattacctgtattaccgccaaaagacaagttcccctacgtaattcgcgtagtttcggaa
gtgctttcttccaacggttcaacttcaatgggttcagtttgtggttctagtttatccctc
atggatgcaggtgtacccattaccaaacctgtgagcggtgcggcaatgggcttgattaag
gaaggggacgaagtacgaatcctcaccgatatccagggcattgaagactttttgggtgac
atggacttcaaagttgctggtacagatactggaattacagctttgcaaatggatatgaaa
atatctggtttgtctttagaagtaattgcccaagctgtcaaccaagccaaacctgcccgg
ttacacattctggaaaaaatgctccagactattgacacccccagggaagaaacttcaccc
tttgccccacgtctgttaacaattaagattgatcctgacatgattggtctggtgattgga
cctggtggtaaaaccattaagggtatcactgaagaaacaggtgcaaagattgacatccaa
gatgatggtactgtcaccatttccgcagttgatgaaaaccgagctaagagagcgcggaat
atcgttcagggcatgactcgtaaactccatgaaggggatgtttacatcggtcgtgtgaca
cgggttatacccattggcgcttttgtggagttcttgcccggtaaagaaggcatgattcac
atttctcaactcgctgactatcgcgttggtaaggttgaagatgaggtagctgttggtgat
gaggtgattgtcaaagtgcgagaaattgacaataagggtcgaattaacctaacacgcttg
ggtattcatccagatcaagccgcagcagcacgagaagcagcagcggtaaaccattaa
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