Dolichospermum heterosporum: NG743_25840
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Entry
NG743_25840 CDS
T08533
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
dht
Dolichospermum heterosporum
Brite
KEGG Orthology (KO) [BR:
dht00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NG743_25840 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dht03021
]
NG743_25840 (rpoD)
Transcription machinery [BR:
dht03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NG743_25840 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
UUO15371
UniProt:
A0ABY5LTP8
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All DBs
Position
5701014..5702186
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AA seq
390 aa
AA seq
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MNQANNVLDNIYQPDLEMINPPEIELQALLIEEEDLLLTDDGEIDDFLEPQSDEDDAKSG
KAAKSRRRTPIAKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIAELLELERARERL
CERLERDPRDSEWAAEVSLPLPTFRYRLHVGRRAKDKMVQSNLRLVVSIAKKYMNRGLSF
QDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYETIS
RIKKTTKLLSQEMGRKPTEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGD
FIESDGETPEDQVSKNLLREDLEKVLDSLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNV
TRERIRQIEAKALRKLRHPNRNSVLKEYIR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggctaacaacgtactcgataatatttatcagcctgacctagaaatgataaat
ccgcctgagatcgaattacaagcactcttaatagaagaagaggacttattgctgactgat
gacggcgaaattgatgattttttagagcctcagtctgatgaggacgacgcaaagtctgga
aaagccgctaaatcgcgtcgtcggacaccaatcgccaagaaaaagcactatacagaagat
tcaattcgtctgtacctgcaagaaattggacggattcgtttgttacgcgcagacgaagaa
attgaactagcgcggaaaatcgctgagttactggaattagaacgggcgcgggaaaggctt
tgtgaacgcctagaacgcgatcctagagacagcgaatgggcggcagaagtatcattacca
ttaccaacctttcgttaccgtctgcacgtgggacgtagagcgaaagacaagatggtacag
tcgaacttgagacttgtagtttccattgccaaaaaatacatgaatcggggcttgtccttc
caagacttgattcaagagggtagtttgggtttgattcgtgcggctgaaaagtttgatcac
gaaaaaggctataagttttctacctacgctacatggtggatacgtcaagcaattacaaga
gcgatcgctgatcagtcccgcactatccgtttaccggttcatctatacgaaaccatttct
cggattaagaaaactaccaaactcctatctcaagaaatggggcgcaaacccacagaagaa
gaaattgcaactcgtatggaaatgaccatcgagaaactgcggtttattgccaaatctgcc
cagttaccaatttctttagaaacacctatcggtaaagaagaagattctcgtttaggtgat
ttcattgaatctgatggtgaaactccagaagatcaagtttctaagaacttgctgcgggaa
gacctagaaaaagtccttgatagtctcagtcctcgggaaagggacgttctccgacttcgc
tatggtttagatgatgggcgcatgaaaactctggaagaaatcggtcagattttcaacgtt
acccgcgaacgcattcgccaaatcgaagctaaagcactccgtaaattacgccatcccaat
cggaatagtgtattgaaagagtatattcgttaa
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