Maridesulfovibrio hydrothermalis: DESAM_20190
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Entry
DESAM_20190 CDS
T02428
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
dhy
Maridesulfovibrio hydrothermalis
Pathway
dhy03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
DESAM_20190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
dhy03011
]
DESAM_20190
Ribosome [BR:
dhy03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
DESAM_20190
Bacteria
DESAM_20190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_cyt-4
PCB_OB
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
CCO22481
UniProt:
L0RA99
LinkDB
All DBs
Position
500852..502357
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AA seq
501 aa
AA seq
DB search
MSEKNLETNGEENFAELFEAFQSESNDNLQVGDQIKGTVISITKDSVFIDTGSKVDGVVT
RDELTNEEGELTVNDGDIVELYVISMNNNEVVLSKAMSGAGGLNMLREAFENSVPVEGKV
EETCKGGFRVKMMHRKVFCPVSQIDTTFVENPEEYVGSTHNFQVIKFEENGRNIVVSRRV
LLEQEQEKAREQFMQDVQPDAVLDGRVTKLMPFGAFVELTPGVEGMVHISELSWSRSAKP
EDVVQPGDEVTVRILSMEPRKDGKGLKIGLSLKQLQADPWDELGDKFKAGDKTTGTVARC
ADFGVFVEIAPGIEGLVHISEMSYTKRVHKPEDEVTPGQEVAVMIKDVDPVKRRIGLSMK
DAAGDPWLDVEDTFKVGQEVEGTVENKAEFGIFINLAPGITGLLPMSRISRSGKQSELES
LKPGDKVKVSIEELNTSDRKVTLTAGDAKKETGDSDWKEYNKTTASRRSAPRKSAAKTSG
DTGGFGGLLGQKLQEAMNKKN
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaaaaacttggaaacaaatggcgaagagaactttgccgaactgtttgaagcc
ttccagtccgaatccaacgacaatcttcaggtcggagatcagatcaagggaactgtaatt
tccatcactaaagattccgtgtttatcgacaccggatctaaagttgacggagttgtaacc
cgagacgaactgaccaatgaggaaggtgaactgaccgttaacgacggagacatcgtagaa
ctctacgtaatctccatgaacaacaacgaagtcgtcctttccaaagccatgtccggcgca
ggcggactcaatatgctgcgtgaagcatttgagaactccgtccctgttgagggcaaggtt
gaggaaacctgcaaaggcggtttcagagtaaaaatgatgcaccgcaaggtgttctgccct
gtcagccagattgacacaacctttgtggaaaatcccgaagagtatgtcggcagcacccac
aattttcaggtcatcaagttcgaagaaaacggtcgcaacattgttgtttcccgtagagtc
cttctcgaacaggaacaggaaaaagcacgcgaacaattcatgcaggatgttcagcccgat
gcagtccttgacggacgcgttacaaagcttatgccttttggcgcattcgtagaacttacc
cccggggtcgaaggcatggttcatatctctgaactcagctggtcccgttctgccaagcct
gaagacgttgtacagcccggcgatgaagtcaccgttagaattctgtctatggaaccgcgc
aaagatggaaagggcctcaaaataggtctttccctcaagcagcttcaggctgatccgtgg
gatgagctgggcgacaaattcaaagcgggcgataaaacaactggcacagttgcccgttgt
gctgacttcggcgtattcgttgaaatcgctcccggcattgaagggctcgttcacatttct
gaaatgagctacacaaaacgggttcataaaccggaagatgaagtcactcccggtcaggaa
gttgctgtaatgatcaaagacgttgatccggttaaacgccgtatcggtctgtccatgaaa
gatgcagcaggtgatccgtggctcgacgttgaagataccttcaaagtcggtcaggaagta
gagggaaccgttgaaaataaagccgaattcggtattttcatcaacctcgcccccggtatt
accggtcttctccccatgtcccgcatctcccgctccggcaaacagtcagagcttgagtct
ttaaaacccggtgacaaggtgaaagtatctattgaagaacttaacacctctgaccgtaag
gtcactctcactgccggtgatgctaaaaaagaaaccggcgacagtgactggaaagaatac
aataaaactacagcctccagaagatctgcaccacgcaaatcagctgctaaaacctccggt
gacactggtggattcggcggcctgctcggacagaaacttcaagaagccatgaataaaaag
aattaa
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