Maridesulfovibrio hydrothermalis: DESAM_20742
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Entry
DESAM_20742 CDS
T02428
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
dhy
Maridesulfovibrio hydrothermalis
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dhy01011
]
DESAM_20742
Enzymes [BR:
dhy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
DESAM_20742
Peptidoglycan biosynthesis and degradation proteins [BR:
dhy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
DESAM_20742
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM2_CERK1_LYK3_4_5
SLT_2
HTH_28
HTH_24
GldM_3rd
HTH_AsnC-type
HTH_30
UBA_NBR1_C
Motif
Other DBs
NCBI-ProteinID:
CCO23029
UniProt:
L0R8F2
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All DBs
Position
complement(1052304..1053950)
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AA seq
548 aa
AA seq
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MTTVKKDKGSKMLNSLRLIALLAIVSLFAGCAAKTAPVAEKEISEPTVQVEEVLDVEVAD
SGVEPLDPELEAAPQDSGELTPEEEKVLYSSSGIYFNLDEHDTKEVQQYFGFFTHKARKT
FTRWLKRSEPFLPYVRQVLKDNDIPEDLAMLPFAESGYNAWAYSRVGAGGMWQFMPYTGR
KFGLRVDWWVDERRDPFKSTHAAVAYLKVLHNMFGDWHLALAAYNAGEGKIGRALKKTGC
DNFFDLTKNNYKLSRRYRLRAETKNYVPKFIAISKIFKNLEELGFDKIDWNNGIQVETVK
VPGGTDLLALAKACGLKWSEFNKLNPHFRRQVSPPDGTINAYLPERVMANAADYLESPSS
RPFAGYKRYKIRKGDSWYRIANRYAVPIAVLKSVNNRKSNLIKPGQYIMIPGKGSKTAVY
TSKTSKTRRTARSRANYRVRKGDTLWDIASRYKVSVRTLKRANGMYSSRLKIGQKLYIPD
NSARRSAKSIAKAENIKQQTVNYRVRRGDNLSKIARRFGVRVSSLMKWNRLNSKSIIRPG
DKIKVYVR
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgactactgtcaaaaaagacaaggggtcgaagatgctgaattcgctccgtttaattgca
cttctggctattgtttcactttttgcaggttgtgctgccaagactgcacctgttgcggaa
aaagagatttccgagcctacggttcaggttgaagaagttcttgatgttgaggttgctgat
tccggcgttgaacctcttgaccctgagcttgaagctgctccgcaggattccggtgaactt
acacctgaagaagaaaaagttctttattcaagctctggaatttacttcaaccttgatgaa
catgacactaaagaagttcaacagtactttggattctttacacataaagcgcgtaaaact
tttacccgctggttgaaacgttctgagccatttcttccctacgttcgtcaggttttaaag
gataatgatattcctgaagatctggccatgcttccttttgcagaaagcggatataacgca
tgggcttattcccgcgtcggagcggggggaatgtggcagttcatgccttataccggtcgc
aagttcggtttgcgggtggactggtgggttgatgaacgcagagatccttttaagtcaact
catgcagcagttgcttatctgaaagttctacataacatgttcggtgactggcatctcgct
ctggctgcttacaatgcaggtgaaggtaagatcggtcgtgcgcttaaaaaaaccggctgt
gataacttttttgacctgactaaaaataattataaactcagcagacgttacagactcagg
gccgagactaaaaattatgtaccgaagttcatagccatatctaaaatttttaaaaacctt
gaagaactgggttttgataaaatagattggaacaacggtattcaggttgagaccgtaaaa
gttcccggcggaacagatttacttgctctggcaaaggcgtgcggtctgaaatggagtgag
tttaacaagcttaaccctcatttccgcagacaggtcagccctcctgatggaactatcaat
gcctatctgcctgaaagagtcatggccaatgcggctgattatcttgaatcacccagctca
cgcccttttgcaggatataaacgctacaaaattcgtaaaggtgattcatggtatcgcata
gcaaatcgctacgctgttcctattgccgttctcaaatccgtcaataatagaaagtccaac
cttatcaaacccggtcagtacatcatgatcccgggtaaaggttccaagactgccgtttac
acatcaaaaacaagcaaaacccgccgcactgcgcgcagcagagcaaattatcgggtacgc
aaaggtgacaccctctgggatatcgccagccgttataaagtcagcgtgagaacacttaaa
cgcgctaacggtatgtattcctccagacttaaaatcggtcaaaaactgtatattcctgat
aactctgcacgcagatctgcaaagtcaattgccaaagcggagaatatcaagcagcagacc
gtcaactaccgtgtcagacgcggtgacaacctttctaaaattgccagacgtttcggcgta
agagtgtcttcacttatgaagtggaacaggctgaactctaaaagtattatccgccccggt
gataagatcaaggtctatgtccggtaa
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