Maridesulfovibrio hydrothermalis: DESAM_20892
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Entry
DESAM_20892 CDS
T02428
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
dhy
Maridesulfovibrio hydrothermalis
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dhy03021
]
DESAM_20892 (rpoH)
Transcription machinery [BR:
dhy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DESAM_20892 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r3
KORA
CFAP58_CC
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CCO23179
UniProt:
L0R8U1
LinkDB
All DBs
Position
complement(1227813..1228781)
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AA seq
322 aa
AA seq
DB search
MTAKEKPIELEPVENEEVKLTPKPDFLPTPRAKGEVATKDPLHLYLQEISRFPLLEPDEE
FRLAKRVQENGDQEAAFRLVSSHLRLVVKIAMDFQRRWMQNVLDLIQEGNVGLMKAVNKF
DPDKGIKFSYYAAFWIKAYILKYIMDNWRMVKIGTTQTQRKLFYNLNKERQRLQTLGFDP
TTSVLSENLNVSEEEITEMDQRLAKNDLSLNLKFGEDSEATRMDFLPDLGPGVEETLANK
EISTLLLDQLRAIAPNLNEKEQVILNDRLLSDSPRTLRDIGEEFGVTRERVRQIEARLLK
KLKEHLVETIKDFSPEWIPDNE
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaaaagaaaaaccaatagaacttgaacccgttgaaaacgaagaagttaagctg
actcctaagccagactttctccccacgcccagagcaaaaggagaggtagccaccaaagat
ccattgcatctttaccttcaggaaatcagccgcttcccgctgctggaacctgatgaggaa
ttccggctggccaaacgggtacaggaaaacggagatcaggaggcagccttccgtcttgtc
tcctcccacttgagactggttgtgaaaatagctatggattttcagcgtcgctggatgcag
aatgtccttgatctcattcaggaaggaaacgtaggactcatgaaagctgtaaataaattt
gatcccgataaaggcatcaaattttcttactatgctgcattctggatcaaagcctatatc
cttaagtatattatggataactggcgtatggtgaaaataggaaccacccagactcagcgc
aaacttttttataatctgaacaaagaacgccagcggttgcagacccttggttttgatccg
accacatccgtgctttctgaaaacctgaatgtcagtgaagaggaaatcaccgagatggac
cagcggctggccaaaaatgacctctccctgaacctcaaattcggagaggattctgaagcc
acacgtatggactttctgccggatctaggtccgggtgttgaagaaactcttgctaataaa
gagatttctacattattacttgaccagcttagagcaattgctcccaaccttaatgagaag
gagcaggtaattttaaacgaccgccttctttctgattccccaagaaccctgcgggatatc
ggtgaagaattcggagtgaccagagaaagagtgcgccagattgaagcaagactgcttaaa
aagttgaaagaacatctggttgaaacaataaaagatttttcccctgagtggatacctgac
aatgaataa
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