KEGG   Maridesulfovibrio hydrothermalis: DESAM_21068
Entry
DESAM_21068       CDS       T02428                                 
Symbol
rny
Name
(GenBank) endoribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
dhy  Maridesulfovibrio hydrothermalis
Pathway
dhy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dhy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DESAM_21068 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dhy03019]
    DESAM_21068 (rny)
Messenger RNA biogenesis [BR:dhy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DESAM_21068 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Hydrolase_3 KH_2 KH-I_KHDC4-BBP PSII_Pbs27
Other DBs
NCBI-ProteinID: CCO23349
UniProt: L0R9C1
LinkDB
Position
1403044..1404600
AA seq 518 aa
MFGDFFLIIFGMALGAAGGYALHRYVNSKRLADSQGLADRIVQEARKEAEAMKKEIRLQA
QDEVYALKKEQENEYKEMERGLRKQEARLQEKEERLEKKLEKVANKESEVVTLEKRMIKQ
EKKLEDLREGLERRKDEHERKLQEVSGLTVEEARDKLMTEIESRTRHEAAKMVRSIEMEA
KEEGSRKARKILALAIQRYSGDYVNEQTVTAVALPSEDMKGRIIGREGRNIRALEAATGV
DLIIDDTPETVVLSAYSPLRREVAKQALERLIHDGRIHPARIEDIVNKVEQEMDVKLREI
GEQATFDVGVHGIHPEIVKLIGQLQYRTSFSQNVLQHSLEVAFLCGIMAAELGMDEKMAK
RAGLLHDIGKAVDHEIEGPHAVIGADLAKKHGESKEIIHAIQAHHEDVPPLSILATLVQA
ADSLSGARPGARKELLENYVKRLEELENVATGFDGVSKAYAIQAGREIRVMVDAEKVTDD
NTHMLCKDIATKIENNMTYPGQIRVTVIRERRSVGYAK
NT seq 1557 nt   +upstreamnt  +downstreamnt
atgttcggggatttttttctgattatttttggaatggccctaggtgccgcaggcggttat
gccctgcaccgttatgtgaattccaagcgcttggcagattcacaggggttggctgacagg
attgtccaggaagcccgtaaagaagctgaagccatgaaaaaagaaatcaggcttcaggct
caggacgaagtttatgctcttaaaaaagagcaggaaaatgagtacaaagaaatggaacgc
ggcctgagaaaacaggaagcgcgtctccaggaaaaagaagaacgtcttgagaaaaagctt
gaaaaggtcgctaataaagagtccgaagttgtgactcttgaaaagcgcatgatcaagcag
gaaaagaaactcgaagacctgcgtgaaggtcttgaaagaagaaaggatgagcatgagcgt
aagcttcaggaagtctccggacttactgtggaggaagcccgcgacaagcttatgactgaa
atagaaagccggactcgtcacgaagcagccaaaatggttcgctcaatcgagatggaagca
aaggaagaaggctcccgcaaggctcgtaagattttggcccttgccatccagcgttattcc
ggtgactacgtgaatgagcagactgttactgctgtggcccttccctcggaagatatgaag
ggacgtatcatcggtcgtgaaggtcgtaacattcgagcgctcgaagcagcgacaggtgtt
gaccttattattgatgatacaccggaaacagttgttctttccgcttacagcccgctgcgc
cgcgaggttgctaagcaggctcttgaaaggttgatccatgacggacgcattcaccctgca
cgaatcgaagacatcgtgaacaaggtggaacaggaaatggacgtcaaactgcgtgaaatc
ggtgaacaggctacatttgatgtaggcgttcacgggattcatcctgagattgttaaattg
atcggccagcttcagtaccgcaccagtttttctcagaatgtgttgcagcactctctggaa
gttgcattcctttgcggaattatggcagcagagctgggcatggacgagaagatggctaag
cgcgcaggacttcttcatgacataggtaaagccgttgaccatgaaatcgaaggaccgcac
gctgttatcggtgctgatcttgctaaaaaacatggtgaatccaaggaaattatccacgct
attcaggctcaccatgaagatgttcctcctctgtcaattctggcgacacttgtacaggct
gcggattcactttccggtgcccgtcccggtgccagaaaagagcttctcgaaaactacgtg
aagcggcttgaagagctggaaaatgttgcgaccggttttgacggagtatccaaggcatat
gccattcaggccggccgtgagatcagggttatggtcgatgctgaaaaagttactgacgat
aatactcatatgctctgtaaagacattgctaccaagattgaaaataatatgacttatccc
ggtcagattcgtgtaaccgtaattcgtgaacgccgttccgtcggttatgcaaaatag

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