Maridesulfovibrio hydrothermalis: DESAM_22507
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Entry
DESAM_22507 CDS
T02428
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
dhy
Maridesulfovibrio hydrothermalis
Pathway
dhy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DESAM_22507 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dhy03019
]
DESAM_22507 (recQ)
03400 DNA repair and recombination proteins [BR:
dhy03400
]
DESAM_22507 (recQ)
Enzymes [BR:
dhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DESAM_22507 (recQ)
Messenger RNA biogenesis [BR:
dhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DESAM_22507 (recQ)
DNA repair and recombination proteins [BR:
dhy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DESAM_22507 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
HTH_40
RecQ_Zn_bind
ResIII
Tuberculin
Motif
Other DBs
NCBI-ProteinID:
CCO24774
UniProt:
L0RDE9
LinkDB
All DBs
Position
2912065..2914293
Genome browser
AA seq
742 aa
AA seq
DB search
MNNTSRRMPLDVLQQTYGYESFKGIQENVINRIMNGGNAVVFMPTGGGKSACYQIPAILR
EGVGIVISPLIALMRDQVAALTQMGVRAACLNSSISGQEANHIIHELHSGNMDLLYVAPE
RLGQPGFIEMLEGIKIALIAIDEAHCVAQWGHDFRPDYLRLGIFAEKFPRVPRLALTATA
DGPTRKEILYRLSFSDDDIFSTGFDRPNIRYTVIPKEQEKRQLLDFIKNDHFAECGIVYR
MSRKKVESTAAWLCKHGINALPYHAGLDVQTRDANQARFMSEDGIVMVATIAFGMGIDKP
DVRYVAHLDLPKTIESYYQETGRAGRDGLPAEAWMSVGIQDMGFLKRMIMSGNAPDERKA
LELRKLNALLAYCESPCCLRQSLLAYFGEELKEPCGNCFTCINPPSTFDGTIAAQKALSN
IYRTEQMYGANYLIDILIGKDNKRISAQGHDKISTYGIGKDFTHDEWLSIHRQLVSQGLV
DVDMEGYGSLKLNSKSWEILKKQREVPLRKDPVLAKSKTRKSRNKLVIGDANSPSLSTPE
AKKLLDSLRALRTQLAQEQQVPSYVIFADKTLLELACYRPESTSELYAVSGLGDQKVFRY
GTAIVETLLKHQQEHGRPDDLTPIAASKVKEVPSQITKKDKAEVSSSALETLELFEDIQD
IEKVAEERSIKPATVYAHLTSCVKAEKINITDVVDFDKPELDCLYDTIKLYESEGFMQLS
PIYNALCGNYSFELLRMVKASM
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaataacacttcccggcgcatgcctcttgacgtacttcaacaaacttacggctacgaa
tctttcaaaggaattcaggaaaacgtaatcaaccgcatcatgaacggcggcaatgccgtt
gttttcatgcctacaggcggcggtaaatcagcctgttaccagattccggcaatattacgt
gaaggtgtgggcatagtaatttcaccactcattgcactcatgcgcgatcaggtggccgcg
ctcactcaaatgggcgtccgggcggcgtgtctgaattcatccatttccgggcaggaagcc
aatcatatcatccacgaacttcatagcggcaatatggatctgctctatgttgccccggaa
agacttggtcagcccggattcattgaaatgctcgagggcataaaaatagcactcatcgca
attgatgaggcacattgcgttgctcaatggggtcacgatttcagacctgactacttacgg
cttggaatatttgcagaaaaattcccccgcgtccccagacttgccctgactgcaacggct
gacggccccacccgcaaagaaattctctaccgcctctcattcagtgatgatgatattttt
tccacaggatttgaccggcccaacatacgctacacggttatccctaaagaacaggagaaa
agacagctacttgatttcattaaaaacgatcattttgccgaatgcggcatagtctatcgc
atgagccgcaaaaaggtcgaatcgacagcggcatggctatgcaaacatggtataaatgct
ctcccctatcacgcaggactggacgtacagacccgtgacgcaaatcaggcccgcttcatg
tccgaagacggaattgtcatggtggcaaccatcgctttcggcatgggtatagataaaccg
gatgtacgctacgtggctcatctggatctgcctaaaaccatcgagtcgtactatcaagag
acagggcgcgccggacgtgacggactaccggccgaagcatggatgtcagtcgggattcag
gacatgggttttctaaaacgcatgataatgtccggcaatgctcctgatgaacgcaaggct
ttagaacttcgcaagctaaatgcacttctggcttattgcgaatcaccatgctgcctgcgc
cagtcacttcttgcctacttcggtgaagaactgaaagaaccatgcgggaactgcttcacc
tgcatcaatccgccctctacatttgatggaactattgcggcccagaaagccctctcaaat
atttaccgcactgaacaaatgtacggggccaactatctgatcgacatacttatcggcaag
gataacaaaagaatctccgcgcaaggccatgacaaaatcagcacatacggaatcggaaaa
gatttcactcacgatgaatggctgtccatacaccgtcagcttgtatcacagggccttgta
gatgttgatatggagggatacggatcactgaaactgaatagcaaaagctgggagattctt
aaaaaacaaagagaagtgccgctacgcaaagatccggttctggccaaatctaaaacacgc
aaatcacgcaacaagctggtcataggcgacgcaaacagcccctcgctgagtacgccggaa
gctaaaaaactgcttgactctcttcgcgcactcagaactcagctggcacaggaacagcaa
gtcccttcatatgttatttttgctgataaaactcttctggaacttgcatgctaccgaccg
gaatcaacaagtgaactatacgccgtcagcggtctgggggaccaaaaggtattcagatat
ggcacggcaatagttgaaactctcctgaaacatcagcaggagcatggcagacctgacgat
cttacccccattgctgcatctaaagtcaaagaagttccatctcaaataaccaaaaaagat
aaagcagaagtctcttcatccgctctggaaacactggaactattcgaagatattcaagat
attgaaaaagtagcagaagagcggtctataaaacctgcgactgtatacgcccacctgaca
tcatgtgtaaaagcagagaaaattaatatcaccgatgtggtggattttgataaacctgaa
ctggactgcctatatgacacaattaaactgtacgaatcagaaggatttatgcagctaagc
ccaatctacaatgcgctatgtggcaactattcctttgaattgctcagaatggtcaaagca
tcaatgtaa
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