Maridesulfovibrio hydrothermalis: DESAM_22531
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Entry
DESAM_22531 CDS
T02428
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dhy
Maridesulfovibrio hydrothermalis
Pathway
dhy03420
Nucleotide excision repair
dhy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DESAM_22531
03430 Mismatch repair
DESAM_22531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dhy03400
]
DESAM_22531
Enzymes [BR:
dhy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DESAM_22531
DNA repair and recombination proteins [BR:
dhy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DESAM_22531
MMR (mismatch excision repair)
Other MMR factors
DESAM_22531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_22
HHH_5
RecR_HhH
Imm68
Motif
Other DBs
NCBI-ProteinID:
CCO24798
UniProt:
L0RDE8
LinkDB
All DBs
Position
2939363..2941480
Genome browser
AA seq
705 aa
AA seq
DB search
MIEFEKELNSAQFEAATHPQGPVLVIAGAGSGKTRTIVYRLAWLVEQGIPPESILLMTFT
RKAAQEMLMRTEQILGRPLHGTSGGTFHAFAFSILRRNSAEIGFPNGFTLMDRSDCEGVI
KEVKDSLGYGKKDRSYPKKATLLDMVTKSRNKEVPIDTLVNSEAFHLATYSQEMEEIGKG
YSIYKKQHGLMDYDDLLFYLEDLLANDKFLRNSLRSRYQYIMVDEYQDTNLVQARIVKLL
AGENGNVMAVGDDAQSIYSFRGADVSNILKFPEIFNDVKLVRLEQNYRSTQPILDLTNAI
LDGAEIKFDKKLFTEKTWGKKPQLMVPLSDFSQSNRILDRIVKLQKKYGPEEVAVLFRAG
YQSYGLEVALKRLGVGYKKYGGLKFNEAAHIKDILAFLRLVTNPADIISWQRTLGHIKGV
GPKTALKIANAVIEAESKALGKFTKKYPLLQEILTDLDGLRKKKSSPGTALEVIIPLYKP
ILVAAYPDDYPRREAGIEQLAQIASNYDDLEIFLADMCLDPDQHSEEEKKEDVVTLSTIH
SAKGLEWNAVIIIDLVEDRFPSKKSMQKPLEYEEERRLLYVACTRAREELIMSAPASINR
RNTDFSEAAIPSPFIRELDPTLFDELQESYSGGMNMKKNNPITPPVSATSASNESKKTNL
KKFGLCKHKIFGKGKIIEKIEPNKVRVNFPGFGPKVIVEDYLELL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgatagaatttgaaaaagaattgaactctgcacaatttgaagctgcaacacacccgcaa
gggcctgttctggttattgccggagccggcagcggaaaaacacgtaccattgtttacaga
ctggcatggcttgtagagcagggtatcccgcctgaatctatcttgcttatgaccttcacc
cgcaaggctgcgcaggaaatgcttatgcgcacagagcaaatactgggtagacctctgcac
ggtaccagcggcggaacatttcatgcttttgctttttctattctacgccgcaactccgcg
gaaataggctttcccaacggcttcacacttatggaccgcagtgactgtgaaggagttatc
aaagaggttaaagacagccttggatacggcaaaaaagatcgctcgtatcccaagaaagcc
accctgctggacatggtaaccaaatcacggaacaaagaagttccgattgatacactggtc
aattctgaagcatttcaccttgcaacttattctcaggaaatggaagagattggcaaaggt
tactctatttacaaaaagcagcacggtctgatggattatgacgacctgcttttctatctt
gaagatctgcttgcaaacgataaatttctgcgcaattccctgcgcagccgatatcaatat
attatggtggatgaatatcaggacaccaaccttgtacaggcacgcattgttaaacttctt
gcaggcgaaaacggaaatgtgatggctgtgggtgatgatgcccagtccatttattcattt
cgcggtgctgatgtgagcaacatcctgaaatttcctgagattttcaatgatgttaagctg
gtgcgccttgagcagaactatcgatctacacagcccattctggacctgactaatgcaatt
ctggacggagctgaaataaaattcgacaaaaaacttttcactgaaaaaacatggggaaaa
aaaccgcaactgatggttcctctaagtgatttcagccaatctaaccgcatattggaccgg
attgtaaaattacagaagaaatacggtcctgaagaagtagcagtgctgttcagagccggc
taccagagttacggactggaagttgcactaaaaagactgggtgtaggatacaaaaaatat
ggcggactgaaatttaatgaagctgcacatattaaagatatccttgctttcctgcgtctt
gtaaccaatccggcggatatcatttcatggcagcgcacactcggacacatcaagggagtc
ggtccgaaaacggctcttaaaattgccaatgcagttattgaggcagaatctaaagctctc
ggtaaattcactaaaaaatatccactgctacaagaaattctcactgatctggatggtctg
cgcaaaaaaaagtcatcaccgggtactgcccttgaagtgattatcccgctttataagccg
attctggttgcagcctatcctgatgattaccctcgccgtgaagccggcatcgaacaactc
gcccaaattgcatccaattatgatgatctggaaattttccttgctgacatgtgccttgac
cccgaccagcacagcgaagaagaaaaaaaagaggatgtagtaaccctctccaccatccat
tccgccaagggactggaatggaacgcggttatcatcatcgatctggtggaagaccgtttt
ccgtccaaaaaatccatgcaaaaacctctggagtatgaagaagaacgcagattactttat
gttgcctgcactcgcgcacgtgaagagttgattatgtctgccccggcctcaattaatcgc
aggaacacagatttttcagaggcagcaatacccagcccttttatacgggaacttgatccg
actctctttgacgaattgcaggaatcatattccggcggcatgaatatgaaaaaaaacaat
cccataacacctccggtatctgcaacttctgcttcaaacgaatcaaagaaaacgaacctt
aaaaaattcggactgtgcaaacataagattttcggcaaaggcaaaatcatagaaaaaatc
gaacctaacaaagtcagagtaaactttcccgggtttggtcctaaggttattgtagaagac
tacctagaactcctgtag
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