Maridesulfovibrio hydrothermalis: DESAM_22818
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Entry
DESAM_22818 CDS
T02428
Name
(GenBank) Ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dhy
Maridesulfovibrio hydrothermalis
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dhy03016
]
DESAM_22818
Enzymes [BR:
dhy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
DESAM_22818
Transfer RNA biogenesis [BR:
dhy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DESAM_22818
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CCO25085
UniProt:
L0RFV0
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All DBs
Position
3235137..3237200
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AA seq
687 aa
AA seq
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MSLFKEGRYIAPGNIVEFMHGNQPQLAFVIEEQAGKVMLYTINKRETKMPAARVLPWIGP
QYSPTATRQEMLDFLVSHQEKRGEIQAGLDTMEIWELAQGELEKAPLEWFAGLLWEKPET
DQISALGRAMIAAKTHFKFQPPEFVIYTQDKVDLRLQQEAEEKSREKIMTAGQELFKNIW
AARESGGKIRPDQIPDMSEEIADGLKSFLMDRVSGLNEEKSNKMWSALRKGLPDHPHLPL
LLAQGWGIIPQHHNYLFDEADYCSDDSWSDKYTDEINRLTDAVETKAAAPCPLPMRSIDA
ATTKDIDDAFNLIKKDDGGYTLTIALARPCMDWDFGGELDQAVMKRGTSIYLPEGTSHMM
PEALGIGALSLFAGELRPALITTFEIDQLGVVTSVSPHTGWVKITDNSTYIAVEQMLRDG
SDDEMALAFELSEKLLELRIKNGAVVIRRPEPELSLDGWPEKTSVKISTKEDTARADQII
SEFMILANSGLGKFAEDHGFPLLYRTQDIVLPSDLSGIVTEPHEIFQRVRQMVPPQMETV
PKKHATLAVTGYSPITSPLRRYADFINMAQLCHYLMEEQPKWDSDELKALADTLQLRLQS
VIKIQRFRPRYWKLLYLLQNKKQWQHAVIVDDSGPLTTLAMPEIQINVRVPRPMLGDKLY
PGQMFQIRFNRIDPLTNELRVVEAMEE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtccctattcaaggaagggcgatatatcgcgcccggaaatattgttgagtttatgcat
ggcaaccagccacagcttgcatttgttattgaagaacaggccggtaaggtcatgctctac
accataaataagcgtgaaacgaaaatgcctgcagcgcgggttcttccgtggatcggaccg
caatattccccaactgctacgcggcaggaaatgcttgattttttagtctcccatcaagaa
aaacgcggcgaaattcaagccgggcttgataccatggaaatatgggagcttgctcagggc
gagcttgaaaaagcaccattagaatggtttgccggacttctctgggaaaaaccggagacc
gaccagatttccgctcttgggcgggccatgattgccgccaagactcatttcaaatttcag
ccgcctgaattcgtgatctacacgcaggacaaagtagacctgcgcctccagcaggaggct
gaagaaaaatcccgcgaaaaaattatgacggcaggtcaggagcttttcaaaaatatctgg
gctgcgcgtgaatcgggcgggaaaataagaccggaccagattccagacatgtctgaagaa
attgccgatggtcttaaatcttttctcatggaccgtgtttccggactgaatgaagaaaaa
tccaacaaaatgtggtccgcactccgcaaaggcctgcctgaccacccacacctgcctttg
ctgctggcacaaggctgggggataattccccagcaccataactatctttttgatgaagca
gactactgctctgatgacagctggtcagataaatatactgacgaaataaacagactgact
gacgcagttgaaaccaaagccgcagccccatgcccgctgcccatgcgctctattgatgca
gcaacgacaaaagacattgatgatgccttcaatctgataaaaaaagatgacggcggctac
actctgacaatcgcccttgcacgcccctgtatggactgggatttcggtggtgaacttgat
caggcggtaatgaaacggggaaccagtatctatctgccggaaggcaccagccatatgatg
cctgaagcattgggtatcggagctttaagcctttttgccggagaactgcgtcctgctctc
atcacaacttttgaaattgatcaactgggtgtcgtcacctccgtgtctccgcacacagga
tgggtgaagattaccgacaacagcacctatatagctgttgaacagatgctcagagacggt
agtgatgatgaaatggctttagccttcgaattgtcagaaaaacttttggaactgcgcatc
aaaaatggtgcggtggttattcgccggccggaaccggagctttccctcgatggatggccc
gaaaaaacttccgttaaaatttccacaaaggaagataccgcccgcgccgaccagattatc
agcgaattcatgattctggcaaactccggattgggtaaatttgctgaagatcacggcttt
cccctgttatacagaactcaggatattgtgctgccctctgatttgagcggcattgtaacc
gagccgcacgaaatttttcaacgtgtccggcagatggttcccccgcagatggaaaccgtc
cccaaaaaacatgcgactcttgctgtgaccggatacagccctatcacgtctccgctgcgc
cgctatgcagactttatcaacatggctcagctttgccattacctgatggaagaacagcct
aagtgggatagcgatgaacttaaagctctggctgacactctgcaactccgcttgcagtca
gtcataaagattcaacgattcagacccagatactggaaactgctctacctgctgcaaaac
aaaaaacagtggcaacatgcggttattgtcgatgacagcggcccgctgacaacactggcc
atgcctgaaattcagatcaatgtccgggttccgcgccccatgctgggtgacaaactgtat
ccgggacagatgtttcagatcagatttaacagaattgaccctctcaccaatgagcttagg
gttgttgaagctatggaagaataa
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