KEGG   Maridesulfovibrio hydrothermalis: DESAM_22906
Entry
DESAM_22906       CDS       T02428                                 
Name
(GenBank) Beta-lactamase domain protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
dhy  Maridesulfovibrio hydrothermalis
Pathway
dhy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:dhy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DESAM_22906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dhy03019]
    DESAM_22906
Messenger RNA biogenesis [BR:dhy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DESAM_22906
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B_2 Lactamase_B Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: CCO25173
UniProt: L0REE4
LinkDB
Position
3331910..3333613
AA seq 567 aa
MSEPQLTVCPLGGLGEIGLNCMLLSTAESLVIIDCGLLFPDDALFGVDIAIPRFDHILSQ
KDRLKAIFLTHGHEDHIGALPWLLPYVDVPVYGSQFTLGLVENKVREHNLEGYVDLREVK
AYDRVDLGDMAFNFFPVCHSIIDGFGLGIETPVGRVVHTGDFKIDRDPLDGQATDLKAFK
EFSEQGVTLLFSDSTNVEQEGFALTEREIKGSMRSLFEDAEGRILVTLFSSHIQRMQEIF
DLAEETGRKVGISGKSLARNIDLARDMGKLRVPSRNIIETDELPDYRDDEIVLLVTGSQG
ESLASLSRLSTGEHRQLNIKEGDLVLMSSRFIPGNTKAITKVINRLYKLGAEVLYEKAQG
IHASGHAHKEELRTMLETVKPKYFIPVHGEYRHLIKHSRLAVETGVAPERALVIEDGEPV
TFLLHGIRFEENIPVQCTLVDGKGVGDVGQTVLKERQLLAGEGLVIVAMVVDVNTGEILR
GPEVTSKGFVFEQHYSHLLEDAKCIVLDVFENIPPGQTGKLKERIRSALRRFFRKVLGRD
PVVIPLVISLTGNEQKDQDSKCDRCEL
NT seq 1704 nt   +upstreamnt  +downstreamnt
atgagtgagccacagcttacagtctgccccttagggggactcggtgaaataggcctgaac
tgtatgctgctcagtacagcggaatctcttgttatcatcgactgcgggttgctttttccc
gatgatgcactcttcggagtagacattgccattccccgctttgaccatatccttagccag
aaagaccggcttaaagctatttttctaactcatggacatgaagaccatatcggcgccctt
ccgtggttgctgccctacgtggatgtgcctgtttacggttcccagtttacactgggactg
gttgaaaacaaagtgcgcgaacacaaccttgaaggttatgtggatttaagagaggtaaaa
gcttatgaccgggtcgacctcggagacatggctttcaacttttttccggtctgccactcc
atcatcgacggcttcggtttaggaattgaaacccctgtaggacgcgtagttcataccggt
gatttcaaaatagaccgagatccgcttgacgggcaggctaccgacctcaaagctttcaaa
gaattttccgaacagggtgtgacacttcttttttctgattcaactaatgttgaacaggag
ggattcgccctgacagagcgcgaaatcaaagggtccatgcgcagcctgtttgaagacgct
gaaggacgaattctggtaactctgttctccagccatattcagcgtatgcaggaaattttc
gaccttgcagaagagacaggcagaaaagtaggaatcagcggaaaatcactcgcccgaaac
atcgaccttgcccgtgatatgggcaaacttcgcgttccatcacgaaacataatcgaaacc
gatgaactgcctgattaccgggatgacgagatagtactgctggttaccggatcacagggc
gaatcactggcttccctttccagactttctaccggtgaacatcgccagctgaatatcaaa
gaaggcgaccttgtactaatgtcttcacgcttcattccgggcaacaccaaagcgatcaca
aaagtcatcaacaggctctacaagctcggggcggaagtcctttatgaaaaagcacaggga
attcatgcctccggtcatgctcataaagaagaactgcgcaccatgcttgaaacagtaaaa
cccaaatattttattcctgttcatggagaatacagacatcttatcaagcattcacgcctg
gctgttgaaacaggtgtggcccctgagcgagccttagtcattgaagacggcgagccggtc
acttttcttctgcacggtatccgttttgaagaaaatatccctgttcagtgcactctggta
gacggaaaaggtgtcggcgatgtgggacagactgtactcaaagaacgtcaattgctcgcc
ggcgaaggacttgtcattgtcgccatggttgtagatgtaaacacaggggaaatcctgcgc
ggacctgaagtgacgtctaaaggatttgtttttgaacagcactactcgcacctgctggaa
gatgctaagtgtatcgttcttgatgtttttgaaaacattcctccaggacagaccggaaag
ctcaaagagagaattcgttcagcactgcgcagatttttccgcaaggtgctcgggcgcgat
ccggttgtaatccctcttgttatctccctgaccggcaacgagcaaaaggatcaggactcc
aaatgtgacaggtgtgaattataa

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