Acidovorax ebreus: Dtpsy_0398
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Entry
Dtpsy_0398 CDS
T00853
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dia
Acidovorax ebreus
Pathway
dia03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dia00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Dtpsy_0398
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dia03021
]
Dtpsy_0398
03400 DNA repair and recombination proteins [BR:
dia03400
]
Dtpsy_0398
Enzymes [BR:
dia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Dtpsy_0398
Transcription machinery [BR:
dia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Dtpsy_0398
DNA repair and recombination proteins [BR:
dia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Dtpsy_0398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACM31882
UniProt:
B9MBW2
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All DBs
Position
403487..404479
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AA seq
330 aa
AA seq
DB search
MQTNLLKPKAINVEQLGPNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTARDIQTPHDVEI
VNPEHVIATLSAGGKLDMQIKVEKGRGYVPGNLRRYADEATKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAITAEDAVRASAKILVEQLAVFAQLEGGELAAFDA
PASSRGAATFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLENWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaatttgctgaaacccaaggcaatcaatgtcgagcaacttggccccaaccgt
gccaaggtggcgttggagccttttgagcgcggttacgggcacacgctgggcaatgccatt
cgccgtgtactgctctcttccatggtgggttacgcagcaacggaggtgacgattgccggt
gtcttgcacgaatactcgtccattgatggcgttcaggaggatgtggtcaacatcctgctc
aacctcaagggggtggtgttcaagctgcacaaccgtgacgaagtcacgctgagcctgcgc
aaggatggcgaaggcgtcgtcacggcgcgcgacatccagacgccgcacgacgttgaaatc
gtgaaccccgagcacgtcattgccactctgtctgcgggcggcaagctggacatgcagatc
aaggtggagaagggccgcggctacgtgcccggcaacctgcgccgctacgcggacgaggcg
acgaagtccattggccgtatcgtgctggatgcttccttctcgccggtcaaacgcgtgagc
tataccgtcgagagcgcgcgtgtggaacagcgcacggacctggacaagctcgtcgtcgag
atcgaaaccaacggcgctattactgccgaggacgcggtccgcgcttccgccaagattctg
gtggaacaactggcagtgttcgcgcagttggaaggcggtgagttggcagctttcgatgcg
ccggcaagctctcgcggcgctgcgaccttcgatccgatcctgctgcgtcctgtggacgaa
ctggaactcaccgttcgctccgccaactgcctcaaggcggagaacatctattacatcggt
gatctgattcagcgaaccgagaatgaactgctgaagacgccgaacctgggtcgcaagtcg
ctcaacgagatcaaggaagtgctcgcttcgcgcggcctgaccctgggtatgaagctcgag
aactggcctccggcagggctcgacaagcgttaa
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