Acidovorax ebreus: Dtpsy_1416
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Entry
Dtpsy_1416 CDS
T00853
Name
(GenBank) helicase c2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
dia
Acidovorax ebreus
Pathway
dia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Dtpsy_1416
09124 Replication and repair
03420 Nucleotide excision repair
Dtpsy_1416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dia03021
]
Dtpsy_1416
03036 Chromosome and associated proteins [BR:
dia03036
]
Dtpsy_1416
03400 DNA repair and recombination proteins [BR:
dia03400
]
Dtpsy_1416
Enzymes [BR:
dia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Dtpsy_1416
Transcription machinery [BR:
dia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Dtpsy_1416
Chromosome and associated proteins [BR:
dia03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Dtpsy_1416
DNA repair and recombination proteins [BR:
dia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Dtpsy_1416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
Motif
Other DBs
NCBI-ProteinID:
ACM32879
UniProt:
A0A9J9Q8S0
LinkDB
All DBs
Position
1483033..1485600
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AA seq
855 aa
AA seq
DB search
MTAAPRPHVVAVRALCEFTARTGDLDLRFTPAPSALEGMEGHRAVQQRRGAGYEAEVPLS
GTYDHLMVRGRADGWNAALGQLEEIKTYRGTLDSVRPHHRALHWAQAQVYGHLLCQARGL
AGLKLALVYVHATTHAETVLVQEHTAAALQAFFATQCQRYLAWAHSEAAHRQQRNAALVR
LRFPLPAFRAGQRELAVAVYRTAHPNAEGASAPAGRCLLAQAPTGIGKTLGTLFPLLKAM
APPATVPPAMTTQGQGRPAPAAAASGAAADAVARGDKEAIKKESASRLPSGLDKLFFLTA
KGTGHGPALHALAQLQGALAPHAPGTPLRVLDLHARDKTCEHPGSACHGDACPLARGFFD
RLPAARAAAVQQPAPWDAPAVRSVALQHGICPYYLSQELVRWADVVVADYHYYYDSAAML
YALTQQQGWRVAVLVDEAHNLLERARSMYTAPLSPFELAAARQTATGPVKKALDALHRQW
NALSKTLGQSVEDADTPGAPGALHTGATAPAHPLAATPTYQAHATVPPALLGAVQRAVGA
MAEAQADQPLPPGDAVLAFYWSLLHFQALAEQFGPHALFDLQHTATPPRSRSGRARTPAT
TLSIRNVMPAPHLAARHAAAQATVLFSGTLSPPQFYRDLLGLPPDTVWLDVAAPFAAHQL
QVRVAPHISTRWRDREASLAPIADLVAAQYAHQPGNYLCFASSFDYLQRLAATLAQRHPQ
VPQWQQTREMDDASRAAFLARFTEGGQGVGLAVLGGAFAEGVDLPGTRLIGAFIATLGLP
QVNAVNDAMQCALDEVMGPGQGYACTYLYPGLRKVVQAAGRVIRTEQDRGVVVLMDDRFQ
RAEVRALLPRWWQVG
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgccccgcgcccccacgtggtggccgtgcgcgcgctgtgcgagttcacggcc
cgcacgggtgacctggacctgcgcttcacccccgcccccagcgcgctcgaaggcatggaa
ggccaccgtgcggtgcagcagcgccgcggcgcaggctacgaggccgaagtgccgctgagc
ggcacgtacgaccacctgatggtgcgcggccgcgccgatggctggaacgcggcgctgggg
cagctcgaagaaatcaagacctaccgcggcacgctggacagcgtgcgcccccaccaccgc
gcgctgcactgggcccaggcccaggtgtacggccacctgctgtgccaggcgcgcgggttg
gcggggctcaagcttgcgctggtctacgtgcacgccaccacccatgccgagaccgtgctg
gtgcaggaacacaccgccgccgcgctgcaggcgttctttgccacgcagtgccagcgctat
ctggcctgggcgcacagcgaggccgcgcaccgccagcagcgcaacgccgccctggtgcgg
ctgcgctttccgctgcccgcattccgcgccgggcagcgcgagctggccgtggccgtgtac
cgcaccgcacaccccaacgcagagggcgccagcgcccccgccgggcgttgcctgctggcc
caggcgcccaccggcatcggcaagaccctgggcacgctgttcccgctgctcaaggctatg
gcgcccccggccacggtacccccggcgatgaccacgcaagggcagggcaggccggctccg
gccgctgccgcatccggcgccgccgccgatgcggtggccagaggggacaaggaagccatc
aaaaaagagagcgcgtcacgcttgcccagtggcctggacaagctgtttttcctcaccgcc
aagggcacgggccacggcccggcgctgcacgcgctggcccagttgcagggcgcgctggca
ccccacgcgcccggcacgccgctgcgcgtgctggacctgcacgcgcgcgacaagacctgc
gaacaccccggcagcgcctgccatggcgatgcctgcccgctggcgcgcggcttctttgac
cggctgcccgccgcccgcgccgccgccgtgcagcagcccgcgccgtgggatgcacccgcc
gtgcgcagcgtggcgctgcagcacggcatctgcccctactacctgtcgcaagagctggtg
cgctgggccgacgtggtggtggccgactaccactactactacgacagcgccgccatgctg
tacgccctcacgcagcagcagggctggcgcgtggccgtgctggtggacgaagcccacaac
ctgctggagcgcgcacgcagcatgtacacggcgccgctctcgcccttcgagctggccgcc
gcacgccagaccgccaccggtcccgtcaagaaggcgctcgacgccttgcaccgccagtgg
aacgcgctgagcaagaccctgggccagagcgtagaggacgctgacacgccgggcgcaccc
ggcgcactgcacaccggcgccaccgcacccgcgcaccccctcgccgccacgcccacttac
caggcccacgccaccgtgccgcccgcgctgctgggcgccgtgcagcgcgccgtgggcgcc
atggccgaggcccaggccgaccagcccctgccgccgggcgacgcggtgctggcgttctac
tggtcgctgctgcacttccaggccctggccgagcagttcggcccgcatgcgctgttcgac
ctgcagcacaccgccacgccaccgcgcagccgcagcggccgggcccgcacacccgccacc
acgctgagcatccgcaacgtcatgcccgcaccgcacctggcggcgcgccacgcggcagcg
caggccacggtgctgttctcgggcacgctcagcccgccgcagttctaccgcgacctgctg
ggcctgccgcccgacaccgtctggctggacgtggccgccccctttgccgcccaccagctg
caggtgcgcgtggccccgcacatctccacccgctggcgcgaccgcgaggcctcgctcgcc
cccatcgccgatctggtggccgcgcagtacgcgcaccagcccggcaactacctgtgcttt
gccagcagcttcgactacttgcagcgcctggccgccaccctggcccagcgccacccgcag
gtgccccaatggcagcaaacgcgcgagatggacgatgccagccgcgccgccttcctcgcc
cgcttcaccgagggcggccagggcgtgggcctggccgtgctgggcggcgcctttgccgaa
ggcgtggacctgccgggcacccgcctcatcggcgccttcatcgccacgctgggcctgccg
caggtgaacgcggtgaacgacgccatgcaatgtgcgctggacgaggtgatgggccccggc
cagggctatgcctgcacctacctctaccccggcctgcgcaaggtggtgcaggccgccggc
cgcgtgatccgcaccgaacaggaccggggcgtggtggtgctgatggacgaccgctttcag
cgtgcagaggtgcgcgcgttgttgccacggtggtggcaggtggggtga
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